Gene : Tp57577_TGAC_v2_gene16830 T. pratense v2
Defline:  (1 of 1) PTHR11246//PTHR11246:SF11 - PRE-MRNA SPLICING FACTOR // SUBFAMILY NOT NAMED Genomic Order:  1376
Name:  ? Tp57577_TGAC_v2_gene16830 Secondary Identifier:  ? PAC:35964358
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene16830 0.5kb upstream 0.5kb upstream 16814 true Tp57577_TGAC_v2_LG4: 13108194-13125007 Trifolium pratense
Tp57577_TGAC_v2_gene16830 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 13108194-13108693 Trifolium pratense
Tp57577_TGAC_v2_gene16830 0.5kb downstream 0.5kb downstream 16814 true Tp57577_TGAC_v2_LG4: 13108694-13125507 Trifolium pratense
Tp57577_TGAC_v2_gene16830 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 13125008-13125507 Trifolium pratense
Tp57577_TGAC_v2_gene16830 1.0kb upstream 1.0kb upstream 17314 true Tp57577_TGAC_v2_LG4: 13107694-13125007 Trifolium pratense
Tp57577_TGAC_v2_gene16830 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 13107694-13108693 Trifolium pratense
Tp57577_TGAC_v2_gene16830 1.0kb downstream 1.0kb downstream 17314 true Tp57577_TGAC_v2_LG4: 13108694-13126007 Trifolium pratense
Tp57577_TGAC_v2_gene16830 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 13125008-13126007 Trifolium pratense
Tp57577_TGAC_v2_gene16830 2.0kb upstream 2.0kb upstream 18314 true Tp57577_TGAC_v2_LG4: 13106694-13125007 Trifolium pratense
Tp57577_TGAC_v2_gene16830 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 13106694-13108693 Trifolium pratense
Tp57577_TGAC_v2_gene16830 2.0kb downstream 2.0kb downstream 18314 true Tp57577_TGAC_v2_LG4: 13108694-13127007 Trifolium pratense
Tp57577_TGAC_v2_gene16830 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 13125008-13127007 Trifolium pratense
Tp57577_TGAC_v2_gene16830 5.0kb upstream 5.0kb upstream 21314 true Tp57577_TGAC_v2_LG4: 13103694-13125007 Trifolium pratense
Tp57577_TGAC_v2_gene16830 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 13103694-13108693 Trifolium pratense
Tp57577_TGAC_v2_gene16830 5.0kb downstream 5.0kb downstream 21314 true Tp57577_TGAC_v2_LG4: 13108694-13130007 Trifolium pratense
Tp57577_TGAC_v2_gene16830 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 13125008-13130007 Trifolium pratense
Tp57577_TGAC_v2_gene16830 10.0kb upstream 10.0kb upstream 26314 true Tp57577_TGAC_v2_LG4: 13098694-13125007 Trifolium pratense
Tp57577_TGAC_v2_gene16830 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 13098694-13108693 Trifolium pratense
Tp57577_TGAC_v2_gene16830 10.0kb downstream 10.0kb downstream 26314 true Tp57577_TGAC_v2_LG4: 13108694-13135007 Trifolium pratense
Tp57577_TGAC_v2_gene16830 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 13125008-13135007 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303869 5265 Fabidae View MSA
124073044 5270 Rosid View MSA
123743134 5271 Pentapetalae View MSA
122794251 5272 Eudicot View MSA
122050325 5273 Angiosperm View MSA
121345578 5274 Embryophyte View MSA
123425422 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain