Gene : Tp57577_TGAC_v2_gene16831 T. pratense v2
Defline:  (1 of 29) PF00407 - Pathogenesis-related protein Bet v I family (Bet_v_1) Genomic Order:  1412
Name:  ? Tp57577_TGAC_v2_gene16831 Secondary Identifier:  ? PAC:35965814
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene16831 0.5kb upstream 0.5kb upstream 1538 true Tp57577_TGAC_v2_LG4: 13386766-13388303 Trifolium pratense
Tp57577_TGAC_v2_gene16831 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 13387804-13388303 Trifolium pratense
Tp57577_TGAC_v2_gene16831 0.5kb downstream 0.5kb downstream 1538 true Tp57577_TGAC_v2_LG4: 13386266-13387803 Trifolium pratense
Tp57577_TGAC_v2_gene16831 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 13386266-13386765 Trifolium pratense
Tp57577_TGAC_v2_gene16831 1.0kb upstream 1.0kb upstream 2038 true Tp57577_TGAC_v2_LG4: 13386766-13388803 Trifolium pratense
Tp57577_TGAC_v2_gene16831 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 13387804-13388803 Trifolium pratense
Tp57577_TGAC_v2_gene16831 1.0kb downstream 1.0kb downstream 2038 true Tp57577_TGAC_v2_LG4: 13385766-13387803 Trifolium pratense
Tp57577_TGAC_v2_gene16831 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 13385766-13386765 Trifolium pratense
Tp57577_TGAC_v2_gene16831 2.0kb upstream 2.0kb upstream 3038 true Tp57577_TGAC_v2_LG4: 13386766-13389803 Trifolium pratense
Tp57577_TGAC_v2_gene16831 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 13387804-13389803 Trifolium pratense
Tp57577_TGAC_v2_gene16831 2.0kb downstream 2.0kb downstream 3038 true Tp57577_TGAC_v2_LG4: 13384766-13387803 Trifolium pratense
Tp57577_TGAC_v2_gene16831 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 13384766-13386765 Trifolium pratense
Tp57577_TGAC_v2_gene16831 5.0kb upstream 5.0kb upstream 6038 true Tp57577_TGAC_v2_LG4: 13386766-13392803 Trifolium pratense
Tp57577_TGAC_v2_gene16831 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 13387804-13392803 Trifolium pratense
Tp57577_TGAC_v2_gene16831 5.0kb downstream 5.0kb downstream 6038 true Tp57577_TGAC_v2_LG4: 13381766-13387803 Trifolium pratense
Tp57577_TGAC_v2_gene16831 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 13381766-13386765 Trifolium pratense
Tp57577_TGAC_v2_gene16831 10.0kb upstream 10.0kb upstream 11038 true Tp57577_TGAC_v2_LG4: 13386766-13397803 Trifolium pratense
Tp57577_TGAC_v2_gene16831 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 13387804-13397803 Trifolium pratense
Tp57577_TGAC_v2_gene16831 10.0kb downstream 10.0kb downstream 11038 true Tp57577_TGAC_v2_LG4: 13376766-13387803 Trifolium pratense
Tp57577_TGAC_v2_gene16831 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 13376766-13386765 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312983 5265 Fabidae View MSA
124072279 5270 Rosid View MSA
123752390 5271 Pentapetalae View MSA
122797871 5272 Eudicot View MSA
122048225 5273 Angiosperm View MSA
121351454 5274 Embryophyte View MSA
123382173 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain