Gene : Tp57577_TGAC_v2_gene16415 T. pratense v2
Defline:  (1 of 58) PF03168 - Late embryogenesis abundant protein (LEA_2) Genomic Order:  301
Name:  ? Tp57577_TGAC_v2_gene16415 Secondary Identifier:  ? PAC:35964627
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene16415 0.5kb upstream 0.5kb upstream 2794 true Tp57577_TGAC_v2_LG4: 2554839-2557632 Trifolium pratense
Tp57577_TGAC_v2_gene16415 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 2554839-2555338 Trifolium pratense
Tp57577_TGAC_v2_gene16415 0.5kb downstream 0.5kb downstream 2794 true Tp57577_TGAC_v2_LG4: 2555339-2558132 Trifolium pratense
Tp57577_TGAC_v2_gene16415 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 2557633-2558132 Trifolium pratense
Tp57577_TGAC_v2_gene16415 1.0kb upstream 1.0kb upstream 3294 true Tp57577_TGAC_v2_LG4: 2554339-2557632 Trifolium pratense
Tp57577_TGAC_v2_gene16415 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 2554339-2555338 Trifolium pratense
Tp57577_TGAC_v2_gene16415 1.0kb downstream 1.0kb downstream 3294 true Tp57577_TGAC_v2_LG4: 2555339-2558632 Trifolium pratense
Tp57577_TGAC_v2_gene16415 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 2557633-2558632 Trifolium pratense
Tp57577_TGAC_v2_gene16415 2.0kb upstream 2.0kb upstream 4294 true Tp57577_TGAC_v2_LG4: 2553339-2557632 Trifolium pratense
Tp57577_TGAC_v2_gene16415 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 2553339-2555338 Trifolium pratense
Tp57577_TGAC_v2_gene16415 2.0kb downstream 2.0kb downstream 4294 true Tp57577_TGAC_v2_LG4: 2555339-2559632 Trifolium pratense
Tp57577_TGAC_v2_gene16415 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 2557633-2559632 Trifolium pratense
Tp57577_TGAC_v2_gene16415 5.0kb upstream 5.0kb upstream 7294 true Tp57577_TGAC_v2_LG4: 2550339-2557632 Trifolium pratense
Tp57577_TGAC_v2_gene16415 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 2550339-2555338 Trifolium pratense
Tp57577_TGAC_v2_gene16415 5.0kb downstream 5.0kb downstream 7294 true Tp57577_TGAC_v2_LG4: 2555339-2562632 Trifolium pratense
Tp57577_TGAC_v2_gene16415 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 2557633-2562632 Trifolium pratense
Tp57577_TGAC_v2_gene16415 10.0kb upstream 10.0kb upstream 12294 true Tp57577_TGAC_v2_LG4: 2545339-2557632 Trifolium pratense
Tp57577_TGAC_v2_gene16415 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 2545339-2555338 Trifolium pratense
Tp57577_TGAC_v2_gene16415 10.0kb downstream 10.0kb downstream 12294 true Tp57577_TGAC_v2_LG4: 2555339-2567632 Trifolium pratense
Tp57577_TGAC_v2_gene16415 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 2557633-2567632 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309281 5265 Fabidae View MSA
124066390 5270 Rosid View MSA
123747844 5271 Pentapetalae View MSA
122788467 5272 Eudicot View MSA
122045066 5273 Angiosperm View MSA
121350373 5274 Embryophyte View MSA
123381702 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain