Gene : Tp57577_TGAC_v2_gene16857 T. pratense v2
Defline:  (1 of 10) 6.2.1.1//6.2.1.2 - Acetate--CoA ligase / Acyl-activating enzyme // Butyrate--CoA ligase / Fatty acid thiokinase (medium chain) Genomic Order:  1398
Name:  ? Tp57577_TGAC_v2_gene16857 Secondary Identifier:  ? PAC:35964152
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

13 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-1121 Trifolium pratense pathologic  
Tpratense PWY-321 Trifolium pratense pathologic  
Tpratense PWY-5136 Trifolium pratense pathologic  
Tpratense PWY-5143 Trifolium pratense pathologic  
Tpratense PWY-5147 Trifolium pratense pathologic  
Tpratense PWY-5156 Trifolium pratense pathologic  
Tpratense PWY-561 Trifolium pratense pathologic  
Tpratense PWY-5885 Trifolium pratense pathologic  
Tpratense PWY-5971 Trifolium pratense pathologic  
Tpratense PWY-5989 Trifolium pratense pathologic  
Tpratense PWY66-21 Trifolium pratense pathologic  
Tpratense PWY-6733 Trifolium pratense pathologic  
Tpratense PWY-6803 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene16857 0.5kb upstream 0.5kb upstream 4335 true Tp57577_TGAC_v2_LG4: 13273834-13278168 Trifolium pratense
Tp57577_TGAC_v2_gene16857 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 13273834-13274333 Trifolium pratense
Tp57577_TGAC_v2_gene16857 0.5kb downstream 0.5kb downstream 4335 true Tp57577_TGAC_v2_LG4: 13274334-13278668 Trifolium pratense
Tp57577_TGAC_v2_gene16857 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 13278169-13278668 Trifolium pratense
Tp57577_TGAC_v2_gene16857 1.0kb upstream 1.0kb upstream 4835 true Tp57577_TGAC_v2_LG4: 13273334-13278168 Trifolium pratense
Tp57577_TGAC_v2_gene16857 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 13273334-13274333 Trifolium pratense
Tp57577_TGAC_v2_gene16857 1.0kb downstream 1.0kb downstream 4835 true Tp57577_TGAC_v2_LG4: 13274334-13279168 Trifolium pratense
Tp57577_TGAC_v2_gene16857 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 13278169-13279168 Trifolium pratense
Tp57577_TGAC_v2_gene16857 2.0kb upstream 2.0kb upstream 5835 true Tp57577_TGAC_v2_LG4: 13272334-13278168 Trifolium pratense
Tp57577_TGAC_v2_gene16857 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 13272334-13274333 Trifolium pratense
Tp57577_TGAC_v2_gene16857 2.0kb downstream 2.0kb downstream 5835 true Tp57577_TGAC_v2_LG4: 13274334-13280168 Trifolium pratense
Tp57577_TGAC_v2_gene16857 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 13278169-13280168 Trifolium pratense
Tp57577_TGAC_v2_gene16857 5.0kb upstream 5.0kb upstream 8835 true Tp57577_TGAC_v2_LG4: 13269334-13278168 Trifolium pratense
Tp57577_TGAC_v2_gene16857 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 13269334-13274333 Trifolium pratense
Tp57577_TGAC_v2_gene16857 5.0kb downstream 5.0kb downstream 8835 true Tp57577_TGAC_v2_LG4: 13274334-13283168 Trifolium pratense
Tp57577_TGAC_v2_gene16857 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 13278169-13283168 Trifolium pratense
Tp57577_TGAC_v2_gene16857 10.0kb upstream 10.0kb upstream 13835 true Tp57577_TGAC_v2_LG4: 13264334-13278168 Trifolium pratense
Tp57577_TGAC_v2_gene16857 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 13264334-13274333 Trifolium pratense
Tp57577_TGAC_v2_gene16857 10.0kb downstream 10.0kb downstream 13835 true Tp57577_TGAC_v2_LG4: 13274334-13288168 Trifolium pratense
Tp57577_TGAC_v2_gene16857 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 13278169-13288168 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308725 5265 Fabidae View MSA
124067015 5270 Rosid View MSA
123740206 5271 Pentapetalae View MSA
122793693 5272 Eudicot View MSA
122045241 5273 Angiosperm View MSA
121345073 5274 Embryophyte View MSA
123427881 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain