Gene : Tp57577_TGAC_v2_gene15979 T. pratense v2
Defline:  (1 of 1) PF01062 - Bestrophin, RFP-TM, chloride channel (Bestrophin) Genomic Order:  2264
Name:  ? Tp57577_TGAC_v2_gene15979 Secondary Identifier:  ? PAC:35964461
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene15979 0.5kb upstream 0.5kb upstream 4514 true Tp57577_TGAC_v2_LG4: 21424688-21429201 Trifolium pratense
Tp57577_TGAC_v2_gene15979 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 21428702-21429201 Trifolium pratense
Tp57577_TGAC_v2_gene15979 0.5kb downstream 0.5kb downstream 4514 true Tp57577_TGAC_v2_LG4: 21424188-21428701 Trifolium pratense
Tp57577_TGAC_v2_gene15979 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 21424188-21424687 Trifolium pratense
Tp57577_TGAC_v2_gene15979 1.0kb upstream 1.0kb upstream 5014 true Tp57577_TGAC_v2_LG4: 21424688-21429701 Trifolium pratense
Tp57577_TGAC_v2_gene15979 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 21428702-21429701 Trifolium pratense
Tp57577_TGAC_v2_gene15979 1.0kb downstream 1.0kb downstream 5014 true Tp57577_TGAC_v2_LG4: 21423688-21428701 Trifolium pratense
Tp57577_TGAC_v2_gene15979 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 21423688-21424687 Trifolium pratense
Tp57577_TGAC_v2_gene15979 2.0kb upstream 2.0kb upstream 6014 true Tp57577_TGAC_v2_LG4: 21424688-21430701 Trifolium pratense
Tp57577_TGAC_v2_gene15979 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 21428702-21430701 Trifolium pratense
Tp57577_TGAC_v2_gene15979 2.0kb downstream 2.0kb downstream 6014 true Tp57577_TGAC_v2_LG4: 21422688-21428701 Trifolium pratense
Tp57577_TGAC_v2_gene15979 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 21422688-21424687 Trifolium pratense
Tp57577_TGAC_v2_gene15979 5.0kb upstream 5.0kb upstream 9014 true Tp57577_TGAC_v2_LG4: 21424688-21433701 Trifolium pratense
Tp57577_TGAC_v2_gene15979 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 21428702-21433701 Trifolium pratense
Tp57577_TGAC_v2_gene15979 5.0kb downstream 5.0kb downstream 9014 true Tp57577_TGAC_v2_LG4: 21419688-21428701 Trifolium pratense
Tp57577_TGAC_v2_gene15979 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 21419688-21424687 Trifolium pratense
Tp57577_TGAC_v2_gene15979 10.0kb upstream 10.0kb upstream 14014 true Tp57577_TGAC_v2_LG4: 21424688-21438701 Trifolium pratense
Tp57577_TGAC_v2_gene15979 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 21428702-21438701 Trifolium pratense
Tp57577_TGAC_v2_gene15979 10.0kb downstream 10.0kb downstream 14014 true Tp57577_TGAC_v2_LG4: 21414688-21428701 Trifolium pratense
Tp57577_TGAC_v2_gene15979 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 21414688-21424687 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300742 5265 Fabidae View MSA
124066850 5270 Rosid View MSA
123736824 5271 Pentapetalae View MSA
122787113 5272 Eudicot View MSA
122051206 5273 Angiosperm View MSA
121349752 5274 Embryophyte View MSA
123427884 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain