Gene : Tp57577_TGAC_v2_gene16407 T. pratense v2
Defline:  (1 of 2) PTHR22763//PTHR22763:SF24 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  311
Name:  ? Tp57577_TGAC_v2_gene16407 Secondary Identifier:  ? PAC:35965818
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7511 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene16407 0.5kb upstream 0.5kb upstream 6079 true Tp57577_TGAC_v2_LG4: 2617274-2623352 Trifolium pratense
Tp57577_TGAC_v2_gene16407 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 2622853-2623352 Trifolium pratense
Tp57577_TGAC_v2_gene16407 0.5kb downstream 0.5kb downstream 6079 true Tp57577_TGAC_v2_LG4: 2616774-2622852 Trifolium pratense
Tp57577_TGAC_v2_gene16407 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 2616774-2617273 Trifolium pratense
Tp57577_TGAC_v2_gene16407 1.0kb upstream 1.0kb upstream 6579 true Tp57577_TGAC_v2_LG4: 2617274-2623852 Trifolium pratense
Tp57577_TGAC_v2_gene16407 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 2622853-2623852 Trifolium pratense
Tp57577_TGAC_v2_gene16407 1.0kb downstream 1.0kb downstream 6579 true Tp57577_TGAC_v2_LG4: 2616274-2622852 Trifolium pratense
Tp57577_TGAC_v2_gene16407 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 2616274-2617273 Trifolium pratense
Tp57577_TGAC_v2_gene16407 2.0kb upstream 2.0kb upstream 7579 true Tp57577_TGAC_v2_LG4: 2617274-2624852 Trifolium pratense
Tp57577_TGAC_v2_gene16407 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 2622853-2624852 Trifolium pratense
Tp57577_TGAC_v2_gene16407 2.0kb downstream 2.0kb downstream 7579 true Tp57577_TGAC_v2_LG4: 2615274-2622852 Trifolium pratense
Tp57577_TGAC_v2_gene16407 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 2615274-2617273 Trifolium pratense
Tp57577_TGAC_v2_gene16407 5.0kb upstream 5.0kb upstream 10579 true Tp57577_TGAC_v2_LG4: 2617274-2627852 Trifolium pratense
Tp57577_TGAC_v2_gene16407 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 2622853-2627852 Trifolium pratense
Tp57577_TGAC_v2_gene16407 5.0kb downstream 5.0kb downstream 10579 true Tp57577_TGAC_v2_LG4: 2612274-2622852 Trifolium pratense
Tp57577_TGAC_v2_gene16407 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 2612274-2617273 Trifolium pratense
Tp57577_TGAC_v2_gene16407 10.0kb upstream 10.0kb upstream 15579 true Tp57577_TGAC_v2_LG4: 2617274-2632852 Trifolium pratense
Tp57577_TGAC_v2_gene16407 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 2622853-2632852 Trifolium pratense
Tp57577_TGAC_v2_gene16407 10.0kb downstream 10.0kb downstream 15579 true Tp57577_TGAC_v2_LG4: 2607274-2622852 Trifolium pratense
Tp57577_TGAC_v2_gene16407 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 2607274-2617273 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311053 5265 Fabidae View MSA
124070952 5270 Rosid View MSA
123745999 5271 Pentapetalae View MSA
122790564 5272 Eudicot View MSA
122048435 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain