Gene : Tp57577_TGAC_v2_gene1296 T. pratense v2

Defline:  (1 of 4) PTHR12758:SF13 - GBF-INTERACTING PROTEIN 1 Genomic Order:  442
Name:  ? Tp57577_TGAC_v2_gene1296 Secondary Identifier:  ? PAC:35963322

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene1296 0.5kb upstream 0.5kb upstream 7512 true Tp57577_TGAC_v2_LG4: 3640606-3648117 Trifolium pratense
Tp57577_TGAC_v2_gene1296 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 3647618-3648117 Trifolium pratense
Tp57577_TGAC_v2_gene1296 0.5kb downstream 0.5kb downstream 7512 true Tp57577_TGAC_v2_LG4: 3640106-3647617 Trifolium pratense
Tp57577_TGAC_v2_gene1296 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 3640106-3640605 Trifolium pratense
Tp57577_TGAC_v2_gene1296 1.0kb upstream 1.0kb upstream 8012 true Tp57577_TGAC_v2_LG4: 3640606-3648617 Trifolium pratense
Tp57577_TGAC_v2_gene1296 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 3647618-3648617 Trifolium pratense
Tp57577_TGAC_v2_gene1296 1.0kb downstream 1.0kb downstream 8012 true Tp57577_TGAC_v2_LG4: 3639606-3647617 Trifolium pratense
Tp57577_TGAC_v2_gene1296 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 3639606-3640605 Trifolium pratense
Tp57577_TGAC_v2_gene1296 2.0kb upstream 2.0kb upstream 9012 true Tp57577_TGAC_v2_LG4: 3640606-3649617 Trifolium pratense
Tp57577_TGAC_v2_gene1296 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 3647618-3649617 Trifolium pratense
Tp57577_TGAC_v2_gene1296 2.0kb downstream 2.0kb downstream 9012 true Tp57577_TGAC_v2_LG4: 3638606-3647617 Trifolium pratense
Tp57577_TGAC_v2_gene1296 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 3638606-3640605 Trifolium pratense
Tp57577_TGAC_v2_gene1296 5.0kb upstream 5.0kb upstream 12012 true Tp57577_TGAC_v2_LG4: 3640606-3652617 Trifolium pratense
Tp57577_TGAC_v2_gene1296 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 3647618-3652617 Trifolium pratense
Tp57577_TGAC_v2_gene1296 5.0kb downstream 5.0kb downstream 12012 true Tp57577_TGAC_v2_LG4: 3635606-3647617 Trifolium pratense
Tp57577_TGAC_v2_gene1296 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 3635606-3640605 Trifolium pratense
Tp57577_TGAC_v2_gene1296 10.0kb upstream 10.0kb upstream 17012 true Tp57577_TGAC_v2_LG4: 3640606-3657617 Trifolium pratense
Tp57577_TGAC_v2_gene1296 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 3647618-3657617 Trifolium pratense
Tp57577_TGAC_v2_gene1296 10.0kb downstream 10.0kb downstream 17012 true Tp57577_TGAC_v2_LG4: 3630606-3647617 Trifolium pratense
Tp57577_TGAC_v2_gene1296 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 3630606-3640605 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779855 5273 Angiosperm View MSA
122302951 5265 Fabidae View MSA
124069952 5270 Rosid View MSA
123744353 5271 Pentapetalae View MSA
122771039 5272 Eudicot View MSA
121051492 5274 Embryophyte View MSA
123091579 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain