Gene : Tp57577_TGAC_v2_gene21091 T. pratense v2
Defline:  (1 of 2) PF01599 - Ribosomal protein S27a (Ribosomal_S27) Genomic Order:  5
Name:  ? Tp57577_TGAC_v2_gene21091 Secondary Identifier:  ? PAC:35966895
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene21091 0.5kb upstream 0.5kb upstream 1548 true Tp57577_TGAC_v2_scaf_383: 38376-39923 Trifolium pratense
Tp57577_TGAC_v2_gene21091 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_383: 38376-38875 Trifolium pratense
Tp57577_TGAC_v2_gene21091 0.5kb downstream 0.5kb downstream 1548 true Tp57577_TGAC_v2_scaf_383: 38876-40423 Trifolium pratense
Tp57577_TGAC_v2_gene21091 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_383: 39924-40423 Trifolium pratense
Tp57577_TGAC_v2_gene21091 1.0kb upstream 1.0kb upstream 2048 true Tp57577_TGAC_v2_scaf_383: 37876-39923 Trifolium pratense
Tp57577_TGAC_v2_gene21091 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_383: 37876-38875 Trifolium pratense
Tp57577_TGAC_v2_gene21091 1.0kb downstream 1.0kb downstream 2048 true Tp57577_TGAC_v2_scaf_383: 38876-40923 Trifolium pratense
Tp57577_TGAC_v2_gene21091 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_383: 39924-40923 Trifolium pratense
Tp57577_TGAC_v2_gene21091 2.0kb upstream 2.0kb upstream 3048 true Tp57577_TGAC_v2_scaf_383: 36876-39923 Trifolium pratense
Tp57577_TGAC_v2_gene21091 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_383: 36876-38875 Trifolium pratense
Tp57577_TGAC_v2_gene21091 2.0kb downstream 2.0kb downstream 3048 true Tp57577_TGAC_v2_scaf_383: 38876-41923 Trifolium pratense
Tp57577_TGAC_v2_gene21091 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_383: 39924-41923 Trifolium pratense
Tp57577_TGAC_v2_gene21091 5.0kb upstream 5.0kb upstream 6048 true Tp57577_TGAC_v2_scaf_383: 33876-39923 Trifolium pratense
Tp57577_TGAC_v2_gene21091 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_383: 33876-38875 Trifolium pratense
Tp57577_TGAC_v2_gene21091 5.0kb downstream 5.0kb downstream 6048 true Tp57577_TGAC_v2_scaf_383: 38876-44923 Trifolium pratense
Tp57577_TGAC_v2_gene21091 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_383: 39924-44923 Trifolium pratense
Tp57577_TGAC_v2_gene21091 10.0kb upstream 10.0kb upstream 11048 true Tp57577_TGAC_v2_scaf_383: 28876-39923 Trifolium pratense
Tp57577_TGAC_v2_gene21091 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_383: 28876-38875 Trifolium pratense
Tp57577_TGAC_v2_gene21091 10.0kb downstream 10.0kb downstream 11048 true Tp57577_TGAC_v2_scaf_383: 38876-49923 Trifolium pratense
Tp57577_TGAC_v2_gene21091 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_383: 39924-49923 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306613 5265 Fabidae View MSA
124071954 5270 Rosid View MSA
123736823 5271 Pentapetalae View MSA
122788692 5272 Eudicot View MSA
122045257 5273 Angiosperm View MSA
121350332 5274 Embryophyte View MSA
123424740 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain