Gene : Tp57577_TGAC_v2_gene13349 T. pratense v2
Defline:  (1 of 1) 1.14.99.33 - Delta(12)-fatty acid dehydrogenase / Linoleate Delta-12-fatty acid acetylenase (desaturase) Genomic Order:  2899
Name:  ? Tp57577_TGAC_v2_gene13349 Secondary Identifier:  ? PAC:35964103
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6013 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene13349 0.5kb upstream 0.5kb upstream 4554 true Tp57577_TGAC_v2_LG4: 26635076-26639629 Trifolium pratense
Tp57577_TGAC_v2_gene13349 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 26635076-26635575 Trifolium pratense
Tp57577_TGAC_v2_gene13349 0.5kb downstream 0.5kb downstream 4554 true Tp57577_TGAC_v2_LG4: 26635576-26640129 Trifolium pratense
Tp57577_TGAC_v2_gene13349 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 26639630-26640129 Trifolium pratense
Tp57577_TGAC_v2_gene13349 1.0kb upstream 1.0kb upstream 5054 true Tp57577_TGAC_v2_LG4: 26634576-26639629 Trifolium pratense
Tp57577_TGAC_v2_gene13349 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 26634576-26635575 Trifolium pratense
Tp57577_TGAC_v2_gene13349 1.0kb downstream 1.0kb downstream 5054 true Tp57577_TGAC_v2_LG4: 26635576-26640629 Trifolium pratense
Tp57577_TGAC_v2_gene13349 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 26639630-26640629 Trifolium pratense
Tp57577_TGAC_v2_gene13349 2.0kb upstream 2.0kb upstream 6054 true Tp57577_TGAC_v2_LG4: 26633576-26639629 Trifolium pratense
Tp57577_TGAC_v2_gene13349 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 26633576-26635575 Trifolium pratense
Tp57577_TGAC_v2_gene13349 2.0kb downstream 2.0kb downstream 6054 true Tp57577_TGAC_v2_LG4: 26635576-26641629 Trifolium pratense
Tp57577_TGAC_v2_gene13349 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 26639630-26641629 Trifolium pratense
Tp57577_TGAC_v2_gene13349 5.0kb upstream 5.0kb upstream 9054 true Tp57577_TGAC_v2_LG4: 26630576-26639629 Trifolium pratense
Tp57577_TGAC_v2_gene13349 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 26630576-26635575 Trifolium pratense
Tp57577_TGAC_v2_gene13349 5.0kb downstream 5.0kb downstream 9054 true Tp57577_TGAC_v2_LG4: 26635576-26644629 Trifolium pratense
Tp57577_TGAC_v2_gene13349 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 26639630-26644629 Trifolium pratense
Tp57577_TGAC_v2_gene13349 10.0kb upstream 10.0kb upstream 14054 true Tp57577_TGAC_v2_LG4: 26625576-26639629 Trifolium pratense
Tp57577_TGAC_v2_gene13349 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 26625576-26635575 Trifolium pratense
Tp57577_TGAC_v2_gene13349 10.0kb downstream 10.0kb downstream 14054 true Tp57577_TGAC_v2_LG4: 26635576-26649629 Trifolium pratense
Tp57577_TGAC_v2_gene13349 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 26639630-26649629 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311667 5265 Fabidae View MSA
124069335 5270 Rosid View MSA
123752062 5271 Pentapetalae View MSA
122788316 5272 Eudicot View MSA
122045494 5273 Angiosperm View MSA
121344489 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain