Gene : Tp57577_TGAC_v2_gene1398 T. pratense v2
Defline:  (1 of 1) K00602 - phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase (purH) Genomic Order:  2440
Name:  ? Tp57577_TGAC_v2_gene1398 Secondary Identifier:  ? PAC:35966253
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6124 Trifolium pratense pathologic  
Tpratense PWY-841 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene1398 0.5kb upstream 0.5kb upstream 6934 true Tp57577_TGAC_v2_LG4: 23034534-23041467 Trifolium pratense
Tp57577_TGAC_v2_gene1398 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 23040968-23041467 Trifolium pratense
Tp57577_TGAC_v2_gene1398 0.5kb downstream 0.5kb downstream 6934 true Tp57577_TGAC_v2_LG4: 23034034-23040967 Trifolium pratense
Tp57577_TGAC_v2_gene1398 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 23034034-23034533 Trifolium pratense
Tp57577_TGAC_v2_gene1398 1.0kb upstream 1.0kb upstream 7434 true Tp57577_TGAC_v2_LG4: 23034534-23041967 Trifolium pratense
Tp57577_TGAC_v2_gene1398 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 23040968-23041967 Trifolium pratense
Tp57577_TGAC_v2_gene1398 1.0kb downstream 1.0kb downstream 7434 true Tp57577_TGAC_v2_LG4: 23033534-23040967 Trifolium pratense
Tp57577_TGAC_v2_gene1398 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 23033534-23034533 Trifolium pratense
Tp57577_TGAC_v2_gene1398 2.0kb upstream 2.0kb upstream 8434 true Tp57577_TGAC_v2_LG4: 23034534-23042967 Trifolium pratense
Tp57577_TGAC_v2_gene1398 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 23040968-23042967 Trifolium pratense
Tp57577_TGAC_v2_gene1398 2.0kb downstream 2.0kb downstream 8434 true Tp57577_TGAC_v2_LG4: 23032534-23040967 Trifolium pratense
Tp57577_TGAC_v2_gene1398 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 23032534-23034533 Trifolium pratense
Tp57577_TGAC_v2_gene1398 5.0kb upstream 5.0kb upstream 11434 true Tp57577_TGAC_v2_LG4: 23034534-23045967 Trifolium pratense
Tp57577_TGAC_v2_gene1398 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 23040968-23045967 Trifolium pratense
Tp57577_TGAC_v2_gene1398 5.0kb downstream 5.0kb downstream 11434 true Tp57577_TGAC_v2_LG4: 23029534-23040967 Trifolium pratense
Tp57577_TGAC_v2_gene1398 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 23029534-23034533 Trifolium pratense
Tp57577_TGAC_v2_gene1398 10.0kb upstream 10.0kb upstream 16434 true Tp57577_TGAC_v2_LG4: 23034534-23050967 Trifolium pratense
Tp57577_TGAC_v2_gene1398 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 23040968-23050967 Trifolium pratense
Tp57577_TGAC_v2_gene1398 10.0kb downstream 10.0kb downstream 16434 true Tp57577_TGAC_v2_LG4: 23024534-23040967 Trifolium pratense
Tp57577_TGAC_v2_gene1398 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 23024534-23034533 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308881 5265 Fabidae View MSA
124063677 5270 Rosid View MSA
123740756 5271 Pentapetalae View MSA
122787954 5272 Eudicot View MSA
122042847 5273 Angiosperm View MSA
121346530 5274 Embryophyte View MSA
123425039 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain