Gene : Tp57577_TGAC_v2_gene1165 T. pratense v2
Defline:  (1 of 1) PTHR12668:SF0 - UPF0136 MEMBRANE PROTEIN CG5532 Genomic Order:  75
Name:  ? Tp57577_TGAC_v2_gene1165 Secondary Identifier:  ? PAC:35963334
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene1165 0.5kb upstream 0.5kb upstream 3069 true Tp57577_TGAC_v2_LG4: 658980-662048 Trifolium pratense
Tp57577_TGAC_v2_gene1165 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 661549-662048 Trifolium pratense
Tp57577_TGAC_v2_gene1165 0.5kb downstream 0.5kb downstream 3069 true Tp57577_TGAC_v2_LG4: 658480-661548 Trifolium pratense
Tp57577_TGAC_v2_gene1165 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 658480-658979 Trifolium pratense
Tp57577_TGAC_v2_gene1165 1.0kb upstream 1.0kb upstream 3569 true Tp57577_TGAC_v2_LG4: 658980-662548 Trifolium pratense
Tp57577_TGAC_v2_gene1165 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 661549-662548 Trifolium pratense
Tp57577_TGAC_v2_gene1165 1.0kb downstream 1.0kb downstream 3569 true Tp57577_TGAC_v2_LG4: 657980-661548 Trifolium pratense
Tp57577_TGAC_v2_gene1165 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 657980-658979 Trifolium pratense
Tp57577_TGAC_v2_gene1165 2.0kb upstream 2.0kb upstream 4569 true Tp57577_TGAC_v2_LG4: 658980-663548 Trifolium pratense
Tp57577_TGAC_v2_gene1165 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 661549-663548 Trifolium pratense
Tp57577_TGAC_v2_gene1165 2.0kb downstream 2.0kb downstream 4569 true Tp57577_TGAC_v2_LG4: 656980-661548 Trifolium pratense
Tp57577_TGAC_v2_gene1165 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 656980-658979 Trifolium pratense
Tp57577_TGAC_v2_gene1165 5.0kb upstream 5.0kb upstream 7569 true Tp57577_TGAC_v2_LG4: 658980-666548 Trifolium pratense
Tp57577_TGAC_v2_gene1165 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 661549-666548 Trifolium pratense
Tp57577_TGAC_v2_gene1165 5.0kb downstream 5.0kb downstream 7569 true Tp57577_TGAC_v2_LG4: 653980-661548 Trifolium pratense
Tp57577_TGAC_v2_gene1165 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 653980-658979 Trifolium pratense
Tp57577_TGAC_v2_gene1165 10.0kb upstream 10.0kb upstream 12569 true Tp57577_TGAC_v2_LG4: 658980-671548 Trifolium pratense
Tp57577_TGAC_v2_gene1165 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 661549-671548 Trifolium pratense
Tp57577_TGAC_v2_gene1165 10.0kb downstream 10.0kb downstream 12569 true Tp57577_TGAC_v2_LG4: 648980-661548 Trifolium pratense
Tp57577_TGAC_v2_gene1165 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 648980-658979 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312511 5265 Fabidae View MSA
124062826 5270 Rosid View MSA
123744265 5271 Pentapetalae View MSA
122793169 5272 Eudicot View MSA
122043738 5273 Angiosperm View MSA
121351316 5274 Embryophyte View MSA
123426664 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain