Gene : Tp57577_TGAC_v2_gene11683 T. pratense v2
Defline:  (1 of 1) K01749 - hydroxymethylbilane synthase (hemC, HMBS) Genomic Order:  740
Name:  ? Tp57577_TGAC_v2_gene11683 Secondary Identifier:  ? PAC:35963811
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5188 Trifolium pratense pathologic  
Tpratense PWY-5918 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene11683 0.5kb upstream 0.5kb upstream 4583 true Tp57577_TGAC_v2_LG4: 6849303-6853885 Trifolium pratense
Tp57577_TGAC_v2_gene11683 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 6853386-6853885 Trifolium pratense
Tp57577_TGAC_v2_gene11683 0.5kb downstream 0.5kb downstream 4583 true Tp57577_TGAC_v2_LG4: 6848803-6853385 Trifolium pratense
Tp57577_TGAC_v2_gene11683 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 6848803-6849302 Trifolium pratense
Tp57577_TGAC_v2_gene11683 1.0kb upstream 1.0kb upstream 5083 true Tp57577_TGAC_v2_LG4: 6849303-6854385 Trifolium pratense
Tp57577_TGAC_v2_gene11683 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 6853386-6854385 Trifolium pratense
Tp57577_TGAC_v2_gene11683 1.0kb downstream 1.0kb downstream 5083 true Tp57577_TGAC_v2_LG4: 6848303-6853385 Trifolium pratense
Tp57577_TGAC_v2_gene11683 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 6848303-6849302 Trifolium pratense
Tp57577_TGAC_v2_gene11683 2.0kb upstream 2.0kb upstream 6083 true Tp57577_TGAC_v2_LG4: 6849303-6855385 Trifolium pratense
Tp57577_TGAC_v2_gene11683 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 6853386-6855385 Trifolium pratense
Tp57577_TGAC_v2_gene11683 2.0kb downstream 2.0kb downstream 6083 true Tp57577_TGAC_v2_LG4: 6847303-6853385 Trifolium pratense
Tp57577_TGAC_v2_gene11683 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 6847303-6849302 Trifolium pratense
Tp57577_TGAC_v2_gene11683 5.0kb upstream 5.0kb upstream 9083 true Tp57577_TGAC_v2_LG4: 6849303-6858385 Trifolium pratense
Tp57577_TGAC_v2_gene11683 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 6853386-6858385 Trifolium pratense
Tp57577_TGAC_v2_gene11683 5.0kb downstream 5.0kb downstream 9083 true Tp57577_TGAC_v2_LG4: 6844303-6853385 Trifolium pratense
Tp57577_TGAC_v2_gene11683 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 6844303-6849302 Trifolium pratense
Tp57577_TGAC_v2_gene11683 10.0kb upstream 10.0kb upstream 14083 true Tp57577_TGAC_v2_LG4: 6849303-6863385 Trifolium pratense
Tp57577_TGAC_v2_gene11683 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 6853386-6863385 Trifolium pratense
Tp57577_TGAC_v2_gene11683 10.0kb downstream 10.0kb downstream 14083 true Tp57577_TGAC_v2_LG4: 6839303-6853385 Trifolium pratense
Tp57577_TGAC_v2_gene11683 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 6839303-6849302 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310703 5265 Fabidae View MSA
124064477 5270 Rosid View MSA
123748249 5271 Pentapetalae View MSA
122787678 5272 Eudicot View MSA
122042710 5273 Angiosperm View MSA
121348830 5274 Embryophyte View MSA
123423964 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain