Gene : Tp57577_TGAC_v2_gene1199 T. pratense v2
Defline:  (1 of 1) K08741 - DNA mismatch repair protein MSH5 (MSH5) Genomic Order:  124
Name:  ? Tp57577_TGAC_v2_gene1199 Secondary Identifier:  ? PAC:35964945
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene1199 0.5kb upstream 0.5kb upstream 16837 true Tp57577_TGAC_v2_LG4: 1036143-1052979 Trifolium pratense
Tp57577_TGAC_v2_gene1199 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 1052480-1052979 Trifolium pratense
Tp57577_TGAC_v2_gene1199 0.5kb downstream 0.5kb downstream 16837 true Tp57577_TGAC_v2_LG4: 1035643-1052479 Trifolium pratense
Tp57577_TGAC_v2_gene1199 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 1035643-1036142 Trifolium pratense
Tp57577_TGAC_v2_gene1199 1.0kb upstream 1.0kb upstream 17337 true Tp57577_TGAC_v2_LG4: 1036143-1053479 Trifolium pratense
Tp57577_TGAC_v2_gene1199 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 1052480-1053479 Trifolium pratense
Tp57577_TGAC_v2_gene1199 1.0kb downstream 1.0kb downstream 17337 true Tp57577_TGAC_v2_LG4: 1035143-1052479 Trifolium pratense
Tp57577_TGAC_v2_gene1199 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 1035143-1036142 Trifolium pratense
Tp57577_TGAC_v2_gene1199 2.0kb upstream 2.0kb upstream 18337 true Tp57577_TGAC_v2_LG4: 1036143-1054479 Trifolium pratense
Tp57577_TGAC_v2_gene1199 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 1052480-1054479 Trifolium pratense
Tp57577_TGAC_v2_gene1199 2.0kb downstream 2.0kb downstream 18337 true Tp57577_TGAC_v2_LG4: 1034143-1052479 Trifolium pratense
Tp57577_TGAC_v2_gene1199 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 1034143-1036142 Trifolium pratense
Tp57577_TGAC_v2_gene1199 5.0kb upstream 5.0kb upstream 21337 true Tp57577_TGAC_v2_LG4: 1036143-1057479 Trifolium pratense
Tp57577_TGAC_v2_gene1199 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 1052480-1057479 Trifolium pratense
Tp57577_TGAC_v2_gene1199 5.0kb downstream 5.0kb downstream 21337 true Tp57577_TGAC_v2_LG4: 1031143-1052479 Trifolium pratense
Tp57577_TGAC_v2_gene1199 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 1031143-1036142 Trifolium pratense
Tp57577_TGAC_v2_gene1199 10.0kb upstream 10.0kb upstream 26337 true Tp57577_TGAC_v2_LG4: 1036143-1062479 Trifolium pratense
Tp57577_TGAC_v2_gene1199 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 1052480-1062479 Trifolium pratense
Tp57577_TGAC_v2_gene1199 10.0kb downstream 10.0kb downstream 26337 true Tp57577_TGAC_v2_LG4: 1026143-1052479 Trifolium pratense
Tp57577_TGAC_v2_gene1199 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 1026143-1036142 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303774 5265 Fabidae View MSA
124066874 5270 Rosid View MSA
123749181 5271 Pentapetalae View MSA
122792549 5272 Eudicot View MSA
122042085 5273 Angiosperm View MSA
121347991 5274 Embryophyte View MSA
123423769 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain