Gene : Tp57577_TGAC_v2_gene11699 T. pratense v2
Defline:  (1 of 1) PTHR37173:SF1 - HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN Genomic Order:  879
Name:  ? Tp57577_TGAC_v2_gene11699 Secondary Identifier:  ? PAC:35964939
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene11699 0.5kb upstream 0.5kb upstream 9595 true Tp57577_TGAC_v2_LG4: 7954717-7964311 Trifolium pratense
Tp57577_TGAC_v2_gene11699 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 7954717-7955216 Trifolium pratense
Tp57577_TGAC_v2_gene11699 0.5kb downstream 0.5kb downstream 9595 true Tp57577_TGAC_v2_LG4: 7955217-7964811 Trifolium pratense
Tp57577_TGAC_v2_gene11699 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 7964312-7964811 Trifolium pratense
Tp57577_TGAC_v2_gene11699 1.0kb upstream 1.0kb upstream 10095 true Tp57577_TGAC_v2_LG4: 7954217-7964311 Trifolium pratense
Tp57577_TGAC_v2_gene11699 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 7954217-7955216 Trifolium pratense
Tp57577_TGAC_v2_gene11699 1.0kb downstream 1.0kb downstream 10095 true Tp57577_TGAC_v2_LG4: 7955217-7965311 Trifolium pratense
Tp57577_TGAC_v2_gene11699 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 7964312-7965311 Trifolium pratense
Tp57577_TGAC_v2_gene11699 2.0kb upstream 2.0kb upstream 11095 true Tp57577_TGAC_v2_LG4: 7953217-7964311 Trifolium pratense
Tp57577_TGAC_v2_gene11699 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 7953217-7955216 Trifolium pratense
Tp57577_TGAC_v2_gene11699 2.0kb downstream 2.0kb downstream 11095 true Tp57577_TGAC_v2_LG4: 7955217-7966311 Trifolium pratense
Tp57577_TGAC_v2_gene11699 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 7964312-7966311 Trifolium pratense
Tp57577_TGAC_v2_gene11699 5.0kb upstream 5.0kb upstream 14095 true Tp57577_TGAC_v2_LG4: 7950217-7964311 Trifolium pratense
Tp57577_TGAC_v2_gene11699 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 7950217-7955216 Trifolium pratense
Tp57577_TGAC_v2_gene11699 5.0kb downstream 5.0kb downstream 14095 true Tp57577_TGAC_v2_LG4: 7955217-7969311 Trifolium pratense
Tp57577_TGAC_v2_gene11699 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 7964312-7969311 Trifolium pratense
Tp57577_TGAC_v2_gene11699 10.0kb upstream 10.0kb upstream 19095 true Tp57577_TGAC_v2_LG4: 7945217-7964311 Trifolium pratense
Tp57577_TGAC_v2_gene11699 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 7945217-7955216 Trifolium pratense
Tp57577_TGAC_v2_gene11699 10.0kb downstream 10.0kb downstream 19095 true Tp57577_TGAC_v2_LG4: 7955217-7974311 Trifolium pratense
Tp57577_TGAC_v2_gene11699 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 7964312-7974311 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304318 5265 Fabidae View MSA
124065426 5270 Rosid View MSA
123746195 5271 Pentapetalae View MSA
122787235 5272 Eudicot View MSA
122045095 5273 Angiosperm View MSA
121345714 5274 Embryophyte View MSA
123425917 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain