Gene : Tp57577_TGAC_v2_gene11730 T. pratense v2
Defline:  (1 of 2) 1.3.1.83 - Geranylgeranyl diphosphate reductase / Geranylgeranyl reductase Genomic Order:  728
Name:  ? Tp57577_TGAC_v2_gene11730 Secondary Identifier:  ? PAC:35966270
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5063 Trifolium pratense pathologic  
Tpratense PWY-5064 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene11730 0.5kb upstream 0.5kb upstream 2057 true Tp57577_TGAC_v2_LG4: 6791679-6793735 Trifolium pratense
Tp57577_TGAC_v2_gene11730 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 6793236-6793735 Trifolium pratense
Tp57577_TGAC_v2_gene11730 0.5kb downstream 0.5kb downstream 2057 true Tp57577_TGAC_v2_LG4: 6791179-6793235 Trifolium pratense
Tp57577_TGAC_v2_gene11730 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 6791179-6791678 Trifolium pratense
Tp57577_TGAC_v2_gene11730 1.0kb upstream 1.0kb upstream 2557 true Tp57577_TGAC_v2_LG4: 6791679-6794235 Trifolium pratense
Tp57577_TGAC_v2_gene11730 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 6793236-6794235 Trifolium pratense
Tp57577_TGAC_v2_gene11730 1.0kb downstream 1.0kb downstream 2557 true Tp57577_TGAC_v2_LG4: 6790679-6793235 Trifolium pratense
Tp57577_TGAC_v2_gene11730 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 6790679-6791678 Trifolium pratense
Tp57577_TGAC_v2_gene11730 2.0kb upstream 2.0kb upstream 3557 true Tp57577_TGAC_v2_LG4: 6791679-6795235 Trifolium pratense
Tp57577_TGAC_v2_gene11730 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 6793236-6795235 Trifolium pratense
Tp57577_TGAC_v2_gene11730 2.0kb downstream 2.0kb downstream 3557 true Tp57577_TGAC_v2_LG4: 6789679-6793235 Trifolium pratense
Tp57577_TGAC_v2_gene11730 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 6789679-6791678 Trifolium pratense
Tp57577_TGAC_v2_gene11730 5.0kb upstream 5.0kb upstream 6557 true Tp57577_TGAC_v2_LG4: 6791679-6798235 Trifolium pratense
Tp57577_TGAC_v2_gene11730 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 6793236-6798235 Trifolium pratense
Tp57577_TGAC_v2_gene11730 5.0kb downstream 5.0kb downstream 6557 true Tp57577_TGAC_v2_LG4: 6786679-6793235 Trifolium pratense
Tp57577_TGAC_v2_gene11730 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 6786679-6791678 Trifolium pratense
Tp57577_TGAC_v2_gene11730 10.0kb upstream 10.0kb upstream 11557 true Tp57577_TGAC_v2_LG4: 6791679-6803235 Trifolium pratense
Tp57577_TGAC_v2_gene11730 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 6793236-6803235 Trifolium pratense
Tp57577_TGAC_v2_gene11730 10.0kb downstream 10.0kb downstream 11557 true Tp57577_TGAC_v2_LG4: 6781679-6793235 Trifolium pratense
Tp57577_TGAC_v2_gene11730 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 6781679-6791678 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304518 5265 Fabidae View MSA
124070478 5270 Rosid View MSA
123742493 5271 Pentapetalae View MSA
122794040 5272 Eudicot View MSA
122041542 5273 Angiosperm View MSA
121345615 5274 Embryophyte View MSA
123424772 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain