Gene : Tp57577_TGAC_v2_gene9070 T. pratense v2
Defline:  (1 of 1) K12844 - U4/U6 small nuclear ribonucleoprotein PRP31 (PRPF31) Genomic Order:  7
Name:  ? Tp57577_TGAC_v2_gene9070 Secondary Identifier:  ? PAC:35953876
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene9070 0.5kb upstream 0.5kb upstream 7793 true Tp57577_TGAC_v2_scaf_522: 100407-108199 Trifolium pratense
Tp57577_TGAC_v2_gene9070 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_522: 107700-108199 Trifolium pratense
Tp57577_TGAC_v2_gene9070 0.5kb downstream 0.5kb downstream 7793 true Tp57577_TGAC_v2_scaf_522: 99907-107699 Trifolium pratense
Tp57577_TGAC_v2_gene9070 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_522: 99907-100406 Trifolium pratense
Tp57577_TGAC_v2_gene9070 1.0kb upstream 1.0kb upstream 8293 true Tp57577_TGAC_v2_scaf_522: 100407-108699 Trifolium pratense
Tp57577_TGAC_v2_gene9070 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_522: 107700-108699 Trifolium pratense
Tp57577_TGAC_v2_gene9070 1.0kb downstream 1.0kb downstream 8293 true Tp57577_TGAC_v2_scaf_522: 99407-107699 Trifolium pratense
Tp57577_TGAC_v2_gene9070 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_522: 99407-100406 Trifolium pratense
Tp57577_TGAC_v2_gene9070 2.0kb upstream 2.0kb upstream 9293 true Tp57577_TGAC_v2_scaf_522: 100407-109699 Trifolium pratense
Tp57577_TGAC_v2_gene9070 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_522: 107700-109699 Trifolium pratense
Tp57577_TGAC_v2_gene9070 2.0kb downstream 2.0kb downstream 9293 true Tp57577_TGAC_v2_scaf_522: 98407-107699 Trifolium pratense
Tp57577_TGAC_v2_gene9070 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_522: 98407-100406 Trifolium pratense
Tp57577_TGAC_v2_gene9070 5.0kb upstream 5.0kb upstream 12293 true Tp57577_TGAC_v2_scaf_522: 100407-112699 Trifolium pratense
Tp57577_TGAC_v2_gene9070 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_522: 107700-112699 Trifolium pratense
Tp57577_TGAC_v2_gene9070 5.0kb downstream 5.0kb downstream 12293 true Tp57577_TGAC_v2_scaf_522: 95407-107699 Trifolium pratense
Tp57577_TGAC_v2_gene9070 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_522: 95407-100406 Trifolium pratense
Tp57577_TGAC_v2_gene9070 10.0kb upstream 10.0kb upstream 17293 true Tp57577_TGAC_v2_scaf_522: 100407-117699 Trifolium pratense
Tp57577_TGAC_v2_gene9070 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_522: 107700-117699 Trifolium pratense
Tp57577_TGAC_v2_gene9070 10.0kb downstream 10.0kb downstream 17293 true Tp57577_TGAC_v2_scaf_522: 90407-107699 Trifolium pratense
Tp57577_TGAC_v2_gene9070 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_522: 90407-100406 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309617 5265 Fabidae View MSA
124062587 5270 Rosid View MSA
123753460 5271 Pentapetalae View MSA
122792370 5272 Eudicot View MSA
122045972 5273 Angiosperm View MSA
123428992 5275 Viridiplantae View MSA
121345979 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain