Gene : Tp57577_TGAC_v2_gene35039 T. pratense v2
Defline:  (1 of 3) PTHR22891:SF40 - PROTEIN ARGONAUTE 5 Genomic Order:  3
Name:  ? Tp57577_TGAC_v2_gene35039 Secondary Identifier:  ? PAC:35983206
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene35039 0.5kb upstream 0.5kb upstream 7052 true Tp57577_TGAC_v2_scaf_670: 15664-22715 Trifolium pratense
Tp57577_TGAC_v2_gene35039 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_670: 22216-22715 Trifolium pratense
Tp57577_TGAC_v2_gene35039 0.5kb downstream 0.5kb downstream 7052 true Tp57577_TGAC_v2_scaf_670: 15164-22215 Trifolium pratense
Tp57577_TGAC_v2_gene35039 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_670: 15164-15663 Trifolium pratense
Tp57577_TGAC_v2_gene35039 1.0kb upstream 1.0kb upstream 7552 true Tp57577_TGAC_v2_scaf_670: 15664-23215 Trifolium pratense
Tp57577_TGAC_v2_gene35039 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_670: 22216-23215 Trifolium pratense
Tp57577_TGAC_v2_gene35039 1.0kb downstream 1.0kb downstream 7552 true Tp57577_TGAC_v2_scaf_670: 14664-22215 Trifolium pratense
Tp57577_TGAC_v2_gene35039 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_670: 14664-15663 Trifolium pratense
Tp57577_TGAC_v2_gene35039 2.0kb upstream 2.0kb upstream 8552 true Tp57577_TGAC_v2_scaf_670: 15664-24215 Trifolium pratense
Tp57577_TGAC_v2_gene35039 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_670: 22216-24215 Trifolium pratense
Tp57577_TGAC_v2_gene35039 2.0kb downstream 2.0kb downstream 8552 true Tp57577_TGAC_v2_scaf_670: 13664-22215 Trifolium pratense
Tp57577_TGAC_v2_gene35039 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_670: 13664-15663 Trifolium pratense
Tp57577_TGAC_v2_gene35039 5.0kb upstream 5.0kb upstream 11552 true Tp57577_TGAC_v2_scaf_670: 15664-27215 Trifolium pratense
Tp57577_TGAC_v2_gene35039 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_670: 22216-27215 Trifolium pratense
Tp57577_TGAC_v2_gene35039 5.0kb downstream 5.0kb downstream 11552 true Tp57577_TGAC_v2_scaf_670: 10664-22215 Trifolium pratense
Tp57577_TGAC_v2_gene35039 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_670: 10664-15663 Trifolium pratense
Tp57577_TGAC_v2_gene35039 10.0kb upstream 10.0kb upstream 16552 true Tp57577_TGAC_v2_scaf_670: 15664-32215 Trifolium pratense
Tp57577_TGAC_v2_gene35039 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_670: 22216-32215 Trifolium pratense
Tp57577_TGAC_v2_gene35039 10.0kb downstream 10.0kb downstream 16552 true Tp57577_TGAC_v2_scaf_670: 5664-22215 Trifolium pratense
Tp57577_TGAC_v2_gene35039 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_670: 5664-15663 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029598 5273 Angiosperm View MSA
122304908 5265 Fabidae View MSA
124068081 5270 Rosid View MSA
123740580 5271 Pentapetalae View MSA
122786970 5272 Eudicot View MSA
121350103 5274 Embryophyte View MSA
123428465 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain