Gene : Tp57577_TGAC_v2_gene22772 T. pratense v2
Defline:  (1 of 1) PTHR22904:SF169 - RNA POLYMERASE II-ASSOCIATED PROTEIN 3 Genomic Order:  7
Name:  ? Tp57577_TGAC_v2_gene22772 Secondary Identifier:  ? PAC:35952133
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene22772 0.5kb upstream 0.5kb upstream 3854 true Tp57577_TGAC_v2_scaf_962: 52735-56588 Trifolium pratense
Tp57577_TGAC_v2_gene22772 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_962: 56089-56588 Trifolium pratense
Tp57577_TGAC_v2_gene22772 0.5kb downstream 0.5kb downstream 3854 true Tp57577_TGAC_v2_scaf_962: 52235-56088 Trifolium pratense
Tp57577_TGAC_v2_gene22772 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_962: 52235-52734 Trifolium pratense
Tp57577_TGAC_v2_gene22772 1.0kb upstream 1.0kb upstream 4354 true Tp57577_TGAC_v2_scaf_962: 52735-57088 Trifolium pratense
Tp57577_TGAC_v2_gene22772 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_962: 56089-57088 Trifolium pratense
Tp57577_TGAC_v2_gene22772 1.0kb downstream 1.0kb downstream 4354 true Tp57577_TGAC_v2_scaf_962: 51735-56088 Trifolium pratense
Tp57577_TGAC_v2_gene22772 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_962: 51735-52734 Trifolium pratense
Tp57577_TGAC_v2_gene22772 2.0kb upstream 2.0kb upstream 5354 true Tp57577_TGAC_v2_scaf_962: 52735-58088 Trifolium pratense
Tp57577_TGAC_v2_gene22772 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_962: 56089-58088 Trifolium pratense
Tp57577_TGAC_v2_gene22772 2.0kb downstream 2.0kb downstream 5354 true Tp57577_TGAC_v2_scaf_962: 50735-56088 Trifolium pratense
Tp57577_TGAC_v2_gene22772 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_962: 50735-52734 Trifolium pratense
Tp57577_TGAC_v2_gene22772 5.0kb upstream 5.0kb upstream 8354 true Tp57577_TGAC_v2_scaf_962: 52735-61088 Trifolium pratense
Tp57577_TGAC_v2_gene22772 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_962: 56089-61088 Trifolium pratense
Tp57577_TGAC_v2_gene22772 5.0kb downstream 5.0kb downstream 8354 true Tp57577_TGAC_v2_scaf_962: 47735-56088 Trifolium pratense
Tp57577_TGAC_v2_gene22772 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_962: 47735-52734 Trifolium pratense
Tp57577_TGAC_v2_gene22772 10.0kb upstream 10.0kb upstream 13354 true Tp57577_TGAC_v2_scaf_962: 52735-66088 Trifolium pratense
Tp57577_TGAC_v2_gene22772 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_962: 56089-66088 Trifolium pratense
Tp57577_TGAC_v2_gene22772 10.0kb downstream 10.0kb downstream 13354 true Tp57577_TGAC_v2_scaf_962: 42735-56088 Trifolium pratense
Tp57577_TGAC_v2_gene22772 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_962: 42735-52734 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026696 5273 Angiosperm View MSA
122303253 5265 Fabidae View MSA
124069433 5270 Rosid View MSA
123746924 5271 Pentapetalae View MSA
122794448 5272 Eudicot View MSA
123429169 5275 Viridiplantae View MSA
121348213 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain