Gene : Tp57577_TGAC_v2_gene22816 T. pratense v2
Defline:  (1 of 2) PTHR11751:SF418 - 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 7 Genomic Order:  1
Name:  ? Tp57577_TGAC_v2_gene22816 Secondary Identifier:  ? PAC:35991965
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense ETHYL-PWY Trifolium pratense pathologic  
Tpratense PWY-7270 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene22816 0.5kb upstream 0.5kb upstream 6290 true Tp57577_TGAC_v2_scaf_967: 3776-10065 Trifolium pratense
Tp57577_TGAC_v2_gene22816 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_967: 3776-4275 Trifolium pratense
Tp57577_TGAC_v2_gene22816 0.5kb downstream 0.5kb downstream 6290 true Tp57577_TGAC_v2_scaf_967: 4276-10565 Trifolium pratense
Tp57577_TGAC_v2_gene22816 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_967: 10066-10565 Trifolium pratense
Tp57577_TGAC_v2_gene22816 1.0kb upstream 1.0kb upstream 6790 true Tp57577_TGAC_v2_scaf_967: 3276-10065 Trifolium pratense
Tp57577_TGAC_v2_gene22816 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_967: 3276-4275 Trifolium pratense
Tp57577_TGAC_v2_gene22816 1.0kb downstream 1.0kb downstream 6790 true Tp57577_TGAC_v2_scaf_967: 4276-11065 Trifolium pratense
Tp57577_TGAC_v2_gene22816 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_967: 10066-11065 Trifolium pratense
Tp57577_TGAC_v2_gene22816 2.0kb upstream 2.0kb upstream 7790 true Tp57577_TGAC_v2_scaf_967: 2276-10065 Trifolium pratense
Tp57577_TGAC_v2_gene22816 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_967: 2276-4275 Trifolium pratense
Tp57577_TGAC_v2_gene22816 2.0kb downstream 2.0kb downstream 7790 true Tp57577_TGAC_v2_scaf_967: 4276-12065 Trifolium pratense
Tp57577_TGAC_v2_gene22816 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_967: 10066-12065 Trifolium pratense
Tp57577_TGAC_v2_gene22816 5.0kb upstream 5.0kb upstream 10065 true Tp57577_TGAC_v2_scaf_967: 1-10065 Trifolium pratense
Tp57577_TGAC_v2_gene22816 5.0kb upstream 5.0kb upstream 4275 false Tp57577_TGAC_v2_scaf_967: 1-4275 Trifolium pratense
Tp57577_TGAC_v2_gene22816 5.0kb downstream 5.0kb downstream 10790 true Tp57577_TGAC_v2_scaf_967: 4276-15065 Trifolium pratense
Tp57577_TGAC_v2_gene22816 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_967: 10066-15065 Trifolium pratense
Tp57577_TGAC_v2_gene22816 10.0kb upstream 10.0kb upstream 10065 true Tp57577_TGAC_v2_scaf_967: 1-10065 Trifolium pratense
Tp57577_TGAC_v2_gene22816 10.0kb upstream 10.0kb upstream 4275 false Tp57577_TGAC_v2_scaf_967: 1-4275 Trifolium pratense
Tp57577_TGAC_v2_gene22816 10.0kb downstream 10.0kb downstream 15790 true Tp57577_TGAC_v2_scaf_967: 4276-20065 Trifolium pratense
Tp57577_TGAC_v2_gene22816 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_967: 10066-20065 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305165 5265 Fabidae View MSA
124060897 5270 Rosid View MSA
123744717 5271 Pentapetalae View MSA
122791155 5272 Eudicot View MSA
122050984 5273 Angiosperm View MSA
121312233 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain