Gene : Tp57577_TGAC_v2_gene21545 T. pratense v2
Defline:  (1 of 3) K10956 - protein transport protein SEC61 subunit alpha (SEC61A) Genomic Order:  10
Name:  ? Tp57577_TGAC_v2_gene21545 Secondary Identifier:  ? PAC:35954080
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene21545 0.5kb upstream 0.5kb upstream 4710 true Tp57577_TGAC_v2_scaf_399: 88836-93545 Trifolium pratense
Tp57577_TGAC_v2_gene21545 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_399: 88836-89335 Trifolium pratense
Tp57577_TGAC_v2_gene21545 0.5kb downstream 0.5kb downstream 4710 true Tp57577_TGAC_v2_scaf_399: 89336-94045 Trifolium pratense
Tp57577_TGAC_v2_gene21545 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_399: 93546-94045 Trifolium pratense
Tp57577_TGAC_v2_gene21545 1.0kb upstream 1.0kb upstream 5210 true Tp57577_TGAC_v2_scaf_399: 88336-93545 Trifolium pratense
Tp57577_TGAC_v2_gene21545 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_399: 88336-89335 Trifolium pratense
Tp57577_TGAC_v2_gene21545 1.0kb downstream 1.0kb downstream 5210 true Tp57577_TGAC_v2_scaf_399: 89336-94545 Trifolium pratense
Tp57577_TGAC_v2_gene21545 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_399: 93546-94545 Trifolium pratense
Tp57577_TGAC_v2_gene21545 2.0kb upstream 2.0kb upstream 6210 true Tp57577_TGAC_v2_scaf_399: 87336-93545 Trifolium pratense
Tp57577_TGAC_v2_gene21545 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_399: 87336-89335 Trifolium pratense
Tp57577_TGAC_v2_gene21545 2.0kb downstream 2.0kb downstream 6210 true Tp57577_TGAC_v2_scaf_399: 89336-95545 Trifolium pratense
Tp57577_TGAC_v2_gene21545 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_399: 93546-95545 Trifolium pratense
Tp57577_TGAC_v2_gene21545 5.0kb upstream 5.0kb upstream 9210 true Tp57577_TGAC_v2_scaf_399: 84336-93545 Trifolium pratense
Tp57577_TGAC_v2_gene21545 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_399: 84336-89335 Trifolium pratense
Tp57577_TGAC_v2_gene21545 5.0kb downstream 5.0kb downstream 9210 true Tp57577_TGAC_v2_scaf_399: 89336-98545 Trifolium pratense
Tp57577_TGAC_v2_gene21545 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_399: 93546-98545 Trifolium pratense
Tp57577_TGAC_v2_gene21545 10.0kb upstream 10.0kb upstream 14210 true Tp57577_TGAC_v2_scaf_399: 79336-93545 Trifolium pratense
Tp57577_TGAC_v2_gene21545 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_399: 79336-89335 Trifolium pratense
Tp57577_TGAC_v2_gene21545 10.0kb downstream 10.0kb downstream 14210 true Tp57577_TGAC_v2_scaf_399: 89336-103545 Trifolium pratense
Tp57577_TGAC_v2_gene21545 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_399: 93546-103545 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303091 5265 Fabidae View MSA
124061120 5270 Rosid View MSA
123743159 5271 Pentapetalae View MSA
122792380 5272 Eudicot View MSA
122043956 5273 Angiosperm View MSA
121349680 5274 Embryophyte View MSA
123426638 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain