Gene : Tp57577_TGAC_v2_gene21523 T. pratense v2
Defline:  (1 of 1) PTHR23070//PTHR23070:SF24 - BCS1 AAA-TYPE ATPASE // SUBFAMILY NOT NAMED Genomic Order:  18
Name:  ? Tp57577_TGAC_v2_gene21523 Secondary Identifier:  ? PAC:35954053
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene21523 0.5kb upstream 0.5kb upstream 3509 true Tp57577_TGAC_v2_scaf_399: 135477-138985 Trifolium pratense
Tp57577_TGAC_v2_gene21523 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_399: 138486-138985 Trifolium pratense
Tp57577_TGAC_v2_gene21523 0.5kb downstream 0.5kb downstream 3509 true Tp57577_TGAC_v2_scaf_399: 134977-138485 Trifolium pratense
Tp57577_TGAC_v2_gene21523 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_399: 134977-135476 Trifolium pratense
Tp57577_TGAC_v2_gene21523 1.0kb upstream 1.0kb upstream 4009 true Tp57577_TGAC_v2_scaf_399: 135477-139485 Trifolium pratense
Tp57577_TGAC_v2_gene21523 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_399: 138486-139485 Trifolium pratense
Tp57577_TGAC_v2_gene21523 1.0kb downstream 1.0kb downstream 4009 true Tp57577_TGAC_v2_scaf_399: 134477-138485 Trifolium pratense
Tp57577_TGAC_v2_gene21523 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_399: 134477-135476 Trifolium pratense
Tp57577_TGAC_v2_gene21523 2.0kb upstream 2.0kb upstream 5009 true Tp57577_TGAC_v2_scaf_399: 135477-140485 Trifolium pratense
Tp57577_TGAC_v2_gene21523 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_399: 138486-140485 Trifolium pratense
Tp57577_TGAC_v2_gene21523 2.0kb downstream 2.0kb downstream 5009 true Tp57577_TGAC_v2_scaf_399: 133477-138485 Trifolium pratense
Tp57577_TGAC_v2_gene21523 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_399: 133477-135476 Trifolium pratense
Tp57577_TGAC_v2_gene21523 5.0kb upstream 5.0kb upstream 8009 true Tp57577_TGAC_v2_scaf_399: 135477-143485 Trifolium pratense
Tp57577_TGAC_v2_gene21523 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_399: 138486-143485 Trifolium pratense
Tp57577_TGAC_v2_gene21523 5.0kb downstream 5.0kb downstream 8009 true Tp57577_TGAC_v2_scaf_399: 130477-138485 Trifolium pratense
Tp57577_TGAC_v2_gene21523 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_399: 130477-135476 Trifolium pratense
Tp57577_TGAC_v2_gene21523 10.0kb upstream 10.0kb upstream 13009 true Tp57577_TGAC_v2_scaf_399: 135477-148485 Trifolium pratense
Tp57577_TGAC_v2_gene21523 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_399: 138486-148485 Trifolium pratense
Tp57577_TGAC_v2_gene21523 10.0kb downstream 10.0kb downstream 13009 true Tp57577_TGAC_v2_scaf_399: 125477-138485 Trifolium pratense
Tp57577_TGAC_v2_gene21523 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_399: 125477-135476 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299311 5265 Fabidae View MSA
124072397 5270 Rosid View MSA
123747421 5271 Pentapetalae View MSA
122795594 5272 Eudicot View MSA
122041675 5273 Angiosperm View MSA
121352297 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain