Gene : Tp57577_TGAC_v2_gene24094 T. pratense v2
Defline:  (1 of 3) PTHR11247:SF25 - LIPID PHOSPHATE PHOSPHATASE EPSILON 1, CHLOROPLASTIC-RELATED Genomic Order:  1042
Name:  ? Tp57577_TGAC_v2_gene24094 Secondary Identifier:  ? PAC:35965272
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense TRIGLSYN-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene24094 0.5kb upstream 0.5kb upstream 2512 true Tp57577_TGAC_v2_LG4: 9602258-9604769 Trifolium pratense
Tp57577_TGAC_v2_gene24094 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 9604270-9604769 Trifolium pratense
Tp57577_TGAC_v2_gene24094 0.5kb downstream 0.5kb downstream 2512 true Tp57577_TGAC_v2_LG4: 9601758-9604269 Trifolium pratense
Tp57577_TGAC_v2_gene24094 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 9601758-9602257 Trifolium pratense
Tp57577_TGAC_v2_gene24094 1.0kb upstream 1.0kb upstream 3012 true Tp57577_TGAC_v2_LG4: 9602258-9605269 Trifolium pratense
Tp57577_TGAC_v2_gene24094 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 9604270-9605269 Trifolium pratense
Tp57577_TGAC_v2_gene24094 1.0kb downstream 1.0kb downstream 3012 true Tp57577_TGAC_v2_LG4: 9601258-9604269 Trifolium pratense
Tp57577_TGAC_v2_gene24094 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 9601258-9602257 Trifolium pratense
Tp57577_TGAC_v2_gene24094 2.0kb upstream 2.0kb upstream 4012 true Tp57577_TGAC_v2_LG4: 9602258-9606269 Trifolium pratense
Tp57577_TGAC_v2_gene24094 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 9604270-9606269 Trifolium pratense
Tp57577_TGAC_v2_gene24094 2.0kb downstream 2.0kb downstream 4012 true Tp57577_TGAC_v2_LG4: 9600258-9604269 Trifolium pratense
Tp57577_TGAC_v2_gene24094 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 9600258-9602257 Trifolium pratense
Tp57577_TGAC_v2_gene24094 5.0kb upstream 5.0kb upstream 7012 true Tp57577_TGAC_v2_LG4: 9602258-9609269 Trifolium pratense
Tp57577_TGAC_v2_gene24094 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 9604270-9609269 Trifolium pratense
Tp57577_TGAC_v2_gene24094 5.0kb downstream 5.0kb downstream 7012 true Tp57577_TGAC_v2_LG4: 9597258-9604269 Trifolium pratense
Tp57577_TGAC_v2_gene24094 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 9597258-9602257 Trifolium pratense
Tp57577_TGAC_v2_gene24094 10.0kb upstream 10.0kb upstream 12012 true Tp57577_TGAC_v2_LG4: 9602258-9614269 Trifolium pratense
Tp57577_TGAC_v2_gene24094 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 9604270-9614269 Trifolium pratense
Tp57577_TGAC_v2_gene24094 10.0kb downstream 10.0kb downstream 12012 true Tp57577_TGAC_v2_LG4: 9592258-9604269 Trifolium pratense
Tp57577_TGAC_v2_gene24094 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 9592258-9602257 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308854 5265 Fabidae View MSA
124066688 5270 Rosid View MSA
123737697 5271 Pentapetalae View MSA
122792032 5272 Eudicot View MSA
122049888 5273 Angiosperm View MSA
121311632 5274 Embryophyte View MSA
123426780 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain