Gene : Tp57577_TGAC_v2_gene20260 T. pratense v2
Defline:  (1 of 7) K19355 - mannan endo-1,4-beta-mannosidase (MAN) Genomic Order:  2146
Name:  ? Tp57577_TGAC_v2_gene20260 Secondary Identifier:  ? PAC:35965196
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene20260 0.5kb upstream 0.5kb upstream 3843 true Tp57577_TGAC_v2_LG4: 20315005-20318847 Trifolium pratense
Tp57577_TGAC_v2_gene20260 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 20315005-20315504 Trifolium pratense
Tp57577_TGAC_v2_gene20260 0.5kb downstream 0.5kb downstream 3843 true Tp57577_TGAC_v2_LG4: 20315505-20319347 Trifolium pratense
Tp57577_TGAC_v2_gene20260 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 20318848-20319347 Trifolium pratense
Tp57577_TGAC_v2_gene20260 1.0kb upstream 1.0kb upstream 4343 true Tp57577_TGAC_v2_LG4: 20314505-20318847 Trifolium pratense
Tp57577_TGAC_v2_gene20260 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 20314505-20315504 Trifolium pratense
Tp57577_TGAC_v2_gene20260 1.0kb downstream 1.0kb downstream 4343 true Tp57577_TGAC_v2_LG4: 20315505-20319847 Trifolium pratense
Tp57577_TGAC_v2_gene20260 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 20318848-20319847 Trifolium pratense
Tp57577_TGAC_v2_gene20260 2.0kb upstream 2.0kb upstream 5343 true Tp57577_TGAC_v2_LG4: 20313505-20318847 Trifolium pratense
Tp57577_TGAC_v2_gene20260 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 20313505-20315504 Trifolium pratense
Tp57577_TGAC_v2_gene20260 2.0kb downstream 2.0kb downstream 5343 true Tp57577_TGAC_v2_LG4: 20315505-20320847 Trifolium pratense
Tp57577_TGAC_v2_gene20260 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 20318848-20320847 Trifolium pratense
Tp57577_TGAC_v2_gene20260 5.0kb upstream 5.0kb upstream 8343 true Tp57577_TGAC_v2_LG4: 20310505-20318847 Trifolium pratense
Tp57577_TGAC_v2_gene20260 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 20310505-20315504 Trifolium pratense
Tp57577_TGAC_v2_gene20260 5.0kb downstream 5.0kb downstream 8343 true Tp57577_TGAC_v2_LG4: 20315505-20323847 Trifolium pratense
Tp57577_TGAC_v2_gene20260 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 20318848-20323847 Trifolium pratense
Tp57577_TGAC_v2_gene20260 10.0kb upstream 10.0kb upstream 13343 true Tp57577_TGAC_v2_LG4: 20305505-20318847 Trifolium pratense
Tp57577_TGAC_v2_gene20260 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 20305505-20315504 Trifolium pratense
Tp57577_TGAC_v2_gene20260 10.0kb downstream 10.0kb downstream 13343 true Tp57577_TGAC_v2_LG4: 20315505-20328847 Trifolium pratense
Tp57577_TGAC_v2_gene20260 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 20318848-20328847 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298512 5265 Fabidae View MSA
124070939 5270 Rosid View MSA
123749910 5271 Pentapetalae View MSA
122795720 5272 Eudicot View MSA
122050009 5273 Angiosperm View MSA
121348976 5274 Embryophyte View MSA
123428551 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain