Gene : Tp57577_TGAC_v2_gene23867 T. pratense v2
Defline:  (1 of 1) K01890 - phenylalanyl-tRNA synthetase beta chain (FARSB, pheT) Genomic Order:  2349
Name:  ? Tp57577_TGAC_v2_gene23867 Secondary Identifier:  ? PAC:35963403
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense TRNA-CHARGING-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene23867 0.5kb upstream 0.5kb upstream 7619 true Tp57577_TGAC_v2_LG4: 22149887-22157505 Trifolium pratense
Tp57577_TGAC_v2_gene23867 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 22157006-22157505 Trifolium pratense
Tp57577_TGAC_v2_gene23867 0.5kb downstream 0.5kb downstream 7619 true Tp57577_TGAC_v2_LG4: 22149387-22157005 Trifolium pratense
Tp57577_TGAC_v2_gene23867 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 22149387-22149886 Trifolium pratense
Tp57577_TGAC_v2_gene23867 1.0kb upstream 1.0kb upstream 8119 true Tp57577_TGAC_v2_LG4: 22149887-22158005 Trifolium pratense
Tp57577_TGAC_v2_gene23867 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 22157006-22158005 Trifolium pratense
Tp57577_TGAC_v2_gene23867 1.0kb downstream 1.0kb downstream 8119 true Tp57577_TGAC_v2_LG4: 22148887-22157005 Trifolium pratense
Tp57577_TGAC_v2_gene23867 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 22148887-22149886 Trifolium pratense
Tp57577_TGAC_v2_gene23867 2.0kb upstream 2.0kb upstream 9119 true Tp57577_TGAC_v2_LG4: 22149887-22159005 Trifolium pratense
Tp57577_TGAC_v2_gene23867 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 22157006-22159005 Trifolium pratense
Tp57577_TGAC_v2_gene23867 2.0kb downstream 2.0kb downstream 9119 true Tp57577_TGAC_v2_LG4: 22147887-22157005 Trifolium pratense
Tp57577_TGAC_v2_gene23867 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 22147887-22149886 Trifolium pratense
Tp57577_TGAC_v2_gene23867 5.0kb upstream 5.0kb upstream 12119 true Tp57577_TGAC_v2_LG4: 22149887-22162005 Trifolium pratense
Tp57577_TGAC_v2_gene23867 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 22157006-22162005 Trifolium pratense
Tp57577_TGAC_v2_gene23867 5.0kb downstream 5.0kb downstream 12119 true Tp57577_TGAC_v2_LG4: 22144887-22157005 Trifolium pratense
Tp57577_TGAC_v2_gene23867 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 22144887-22149886 Trifolium pratense
Tp57577_TGAC_v2_gene23867 10.0kb upstream 10.0kb upstream 17119 true Tp57577_TGAC_v2_LG4: 22149887-22167005 Trifolium pratense
Tp57577_TGAC_v2_gene23867 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 22157006-22167005 Trifolium pratense
Tp57577_TGAC_v2_gene23867 10.0kb downstream 10.0kb downstream 17119 true Tp57577_TGAC_v2_LG4: 22139887-22157005 Trifolium pratense
Tp57577_TGAC_v2_gene23867 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 22139887-22149886 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302005 5265 Fabidae View MSA
124062601 5270 Rosid View MSA
123738962 5271 Pentapetalae View MSA
122792851 5272 Eudicot View MSA
122042437 5273 Angiosperm View MSA
121345306 5274 Embryophyte View MSA
123425015 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain