Gene : Tp57577_TGAC_v2_gene21658 T. pratense v2
Defline:  (1 of 1) PF00036//PF00070 - EF hand (EF-hand_1) // Pyridine nucleotide-disulphide oxidoreductase (Pyr_redox) Genomic Order:  2166
Name:  ? Tp57577_TGAC_v2_gene21658 Secondary Identifier:  ? PAC:35964763
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7279 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene21658 0.5kb upstream 0.5kb upstream 6046 true Tp57577_TGAC_v2_LG4: 20490220-20496265 Trifolium pratense
Tp57577_TGAC_v2_gene21658 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 20495766-20496265 Trifolium pratense
Tp57577_TGAC_v2_gene21658 0.5kb downstream 0.5kb downstream 6046 true Tp57577_TGAC_v2_LG4: 20489720-20495765 Trifolium pratense
Tp57577_TGAC_v2_gene21658 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 20489720-20490219 Trifolium pratense
Tp57577_TGAC_v2_gene21658 1.0kb upstream 1.0kb upstream 6546 true Tp57577_TGAC_v2_LG4: 20490220-20496765 Trifolium pratense
Tp57577_TGAC_v2_gene21658 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 20495766-20496765 Trifolium pratense
Tp57577_TGAC_v2_gene21658 1.0kb downstream 1.0kb downstream 6546 true Tp57577_TGAC_v2_LG4: 20489220-20495765 Trifolium pratense
Tp57577_TGAC_v2_gene21658 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 20489220-20490219 Trifolium pratense
Tp57577_TGAC_v2_gene21658 2.0kb upstream 2.0kb upstream 7546 true Tp57577_TGAC_v2_LG4: 20490220-20497765 Trifolium pratense
Tp57577_TGAC_v2_gene21658 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 20495766-20497765 Trifolium pratense
Tp57577_TGAC_v2_gene21658 2.0kb downstream 2.0kb downstream 7546 true Tp57577_TGAC_v2_LG4: 20488220-20495765 Trifolium pratense
Tp57577_TGAC_v2_gene21658 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 20488220-20490219 Trifolium pratense
Tp57577_TGAC_v2_gene21658 5.0kb upstream 5.0kb upstream 10546 true Tp57577_TGAC_v2_LG4: 20490220-20500765 Trifolium pratense
Tp57577_TGAC_v2_gene21658 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 20495766-20500765 Trifolium pratense
Tp57577_TGAC_v2_gene21658 5.0kb downstream 5.0kb downstream 10546 true Tp57577_TGAC_v2_LG4: 20485220-20495765 Trifolium pratense
Tp57577_TGAC_v2_gene21658 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 20485220-20490219 Trifolium pratense
Tp57577_TGAC_v2_gene21658 10.0kb upstream 10.0kb upstream 15546 true Tp57577_TGAC_v2_LG4: 20490220-20505765 Trifolium pratense
Tp57577_TGAC_v2_gene21658 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 20495766-20505765 Trifolium pratense
Tp57577_TGAC_v2_gene21658 10.0kb downstream 10.0kb downstream 15546 true Tp57577_TGAC_v2_LG4: 20480220-20495765 Trifolium pratense
Tp57577_TGAC_v2_gene21658 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 20480220-20490219 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306603 5265 Fabidae View MSA
124065311 5270 Rosid View MSA
123739176 5271 Pentapetalae View MSA
122786573 5272 Eudicot View MSA
122046891 5273 Angiosperm View MSA
121348097 5274 Embryophyte View MSA
123427504 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain