Gene : Tp57577_TGAC_v2_gene21772 T. pratense v2
Defline:  (1 of 2) 2.5.1.55 - 3-deoxy-8-phosphooctulonate synthase / Phospho-2-keto-3-deoxyoctonate aldolase Genomic Order:  1590
Name:  ? Tp57577_TGAC_v2_gene21772 Secondary Identifier:  ? PAC:35965286
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-1269 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene21772 0.5kb upstream 0.5kb upstream 5798 true Tp57577_TGAC_v2_LG4: 15119524-15125321 Trifolium pratense
Tp57577_TGAC_v2_gene21772 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 15119524-15120023 Trifolium pratense
Tp57577_TGAC_v2_gene21772 0.5kb downstream 0.5kb downstream 5798 true Tp57577_TGAC_v2_LG4: 15120024-15125821 Trifolium pratense
Tp57577_TGAC_v2_gene21772 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 15125322-15125821 Trifolium pratense
Tp57577_TGAC_v2_gene21772 1.0kb upstream 1.0kb upstream 6298 true Tp57577_TGAC_v2_LG4: 15119024-15125321 Trifolium pratense
Tp57577_TGAC_v2_gene21772 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 15119024-15120023 Trifolium pratense
Tp57577_TGAC_v2_gene21772 1.0kb downstream 1.0kb downstream 6298 true Tp57577_TGAC_v2_LG4: 15120024-15126321 Trifolium pratense
Tp57577_TGAC_v2_gene21772 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 15125322-15126321 Trifolium pratense
Tp57577_TGAC_v2_gene21772 2.0kb upstream 2.0kb upstream 7298 true Tp57577_TGAC_v2_LG4: 15118024-15125321 Trifolium pratense
Tp57577_TGAC_v2_gene21772 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 15118024-15120023 Trifolium pratense
Tp57577_TGAC_v2_gene21772 2.0kb downstream 2.0kb downstream 7298 true Tp57577_TGAC_v2_LG4: 15120024-15127321 Trifolium pratense
Tp57577_TGAC_v2_gene21772 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 15125322-15127321 Trifolium pratense
Tp57577_TGAC_v2_gene21772 5.0kb upstream 5.0kb upstream 10298 true Tp57577_TGAC_v2_LG4: 15115024-15125321 Trifolium pratense
Tp57577_TGAC_v2_gene21772 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 15115024-15120023 Trifolium pratense
Tp57577_TGAC_v2_gene21772 5.0kb downstream 5.0kb downstream 10298 true Tp57577_TGAC_v2_LG4: 15120024-15130321 Trifolium pratense
Tp57577_TGAC_v2_gene21772 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 15125322-15130321 Trifolium pratense
Tp57577_TGAC_v2_gene21772 10.0kb upstream 10.0kb upstream 15298 true Tp57577_TGAC_v2_LG4: 15110024-15125321 Trifolium pratense
Tp57577_TGAC_v2_gene21772 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 15110024-15120023 Trifolium pratense
Tp57577_TGAC_v2_gene21772 10.0kb downstream 10.0kb downstream 15298 true Tp57577_TGAC_v2_LG4: 15120024-15135321 Trifolium pratense
Tp57577_TGAC_v2_gene21772 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 15125322-15135321 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307124 5265 Fabidae View MSA
124065016 5270 Rosid View MSA
123738710 5271 Pentapetalae View MSA
122788202 5272 Eudicot View MSA
122050140 5273 Angiosperm View MSA
121346522 5274 Embryophyte View MSA
123424720 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain