Gene : Tp57577_TGAC_v2_gene17887 T. pratense v2
Defline:  (1 of 3) 1.2.1.41 - Glutamate-5-semialdehyde dehydrogenase / Glutamyl-gamma-semialdehyde dehydrogenase Genomic Order:  1304
Name:  ? Tp57577_TGAC_v2_gene17887 Secondary Identifier:  ? PAC:35965146
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense ARGININE-SYN4-PWY Trifolium pratense pathologic  
Tpratense CITRULBIO-PWY Trifolium pratense pathologic  
Tpratense PROSYN-PWY Trifolium pratense pathologic  
Tpratense PWY-3341 Trifolium pratense pathologic  
Tpratense PWY-6922 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene17887 0.5kb upstream 0.5kb upstream 9086 true Tp57577_TGAC_v2_LG4: 12448845-12457930 Trifolium pratense
Tp57577_TGAC_v2_gene17887 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 12448845-12449344 Trifolium pratense
Tp57577_TGAC_v2_gene17887 0.5kb downstream 0.5kb downstream 9086 true Tp57577_TGAC_v2_LG4: 12449345-12458430 Trifolium pratense
Tp57577_TGAC_v2_gene17887 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 12457931-12458430 Trifolium pratense
Tp57577_TGAC_v2_gene17887 1.0kb upstream 1.0kb upstream 9586 true Tp57577_TGAC_v2_LG4: 12448345-12457930 Trifolium pratense
Tp57577_TGAC_v2_gene17887 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 12448345-12449344 Trifolium pratense
Tp57577_TGAC_v2_gene17887 1.0kb downstream 1.0kb downstream 9586 true Tp57577_TGAC_v2_LG4: 12449345-12458930 Trifolium pratense
Tp57577_TGAC_v2_gene17887 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 12457931-12458930 Trifolium pratense
Tp57577_TGAC_v2_gene17887 2.0kb upstream 2.0kb upstream 10586 true Tp57577_TGAC_v2_LG4: 12447345-12457930 Trifolium pratense
Tp57577_TGAC_v2_gene17887 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 12447345-12449344 Trifolium pratense
Tp57577_TGAC_v2_gene17887 2.0kb downstream 2.0kb downstream 10586 true Tp57577_TGAC_v2_LG4: 12449345-12459930 Trifolium pratense
Tp57577_TGAC_v2_gene17887 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 12457931-12459930 Trifolium pratense
Tp57577_TGAC_v2_gene17887 5.0kb upstream 5.0kb upstream 13586 true Tp57577_TGAC_v2_LG4: 12444345-12457930 Trifolium pratense
Tp57577_TGAC_v2_gene17887 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 12444345-12449344 Trifolium pratense
Tp57577_TGAC_v2_gene17887 5.0kb downstream 5.0kb downstream 13586 true Tp57577_TGAC_v2_LG4: 12449345-12462930 Trifolium pratense
Tp57577_TGAC_v2_gene17887 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 12457931-12462930 Trifolium pratense
Tp57577_TGAC_v2_gene17887 10.0kb upstream 10.0kb upstream 18586 true Tp57577_TGAC_v2_LG4: 12439345-12457930 Trifolium pratense
Tp57577_TGAC_v2_gene17887 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 12439345-12449344 Trifolium pratense
Tp57577_TGAC_v2_gene17887 10.0kb downstream 10.0kb downstream 18586 true Tp57577_TGAC_v2_LG4: 12449345-12467930 Trifolium pratense
Tp57577_TGAC_v2_gene17887 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 12457931-12467930 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309637 5265 Fabidae View MSA
124064973 5270 Rosid View MSA
123744591 5271 Pentapetalae View MSA
122786608 5272 Eudicot View MSA
122047433 5273 Angiosperm View MSA
121343806 5274 Embryophyte View MSA
123427959 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain