Gene : Tp57577_TGAC_v2_gene19184 T. pratense v2
Defline:  (1 of 2) K00164 - 2-oxoglutarate dehydrogenase E1 component (OGDH, sucA) Genomic Order:  481
Name:  ? Tp57577_TGAC_v2_gene19184 Secondary Identifier:  ? PAC:35963993
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5084 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene19184 0.5kb upstream 0.5kb upstream 6792 true Tp57577_TGAC_v2_LG4: 4158171-4164962 Trifolium pratense
Tp57577_TGAC_v2_gene19184 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 4164463-4164962 Trifolium pratense
Tp57577_TGAC_v2_gene19184 0.5kb downstream 0.5kb downstream 6792 true Tp57577_TGAC_v2_LG4: 4157671-4164462 Trifolium pratense
Tp57577_TGAC_v2_gene19184 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 4157671-4158170 Trifolium pratense
Tp57577_TGAC_v2_gene19184 1.0kb upstream 1.0kb upstream 7292 true Tp57577_TGAC_v2_LG4: 4158171-4165462 Trifolium pratense
Tp57577_TGAC_v2_gene19184 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 4164463-4165462 Trifolium pratense
Tp57577_TGAC_v2_gene19184 1.0kb downstream 1.0kb downstream 7292 true Tp57577_TGAC_v2_LG4: 4157171-4164462 Trifolium pratense
Tp57577_TGAC_v2_gene19184 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 4157171-4158170 Trifolium pratense
Tp57577_TGAC_v2_gene19184 2.0kb upstream 2.0kb upstream 8292 true Tp57577_TGAC_v2_LG4: 4158171-4166462 Trifolium pratense
Tp57577_TGAC_v2_gene19184 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 4164463-4166462 Trifolium pratense
Tp57577_TGAC_v2_gene19184 2.0kb downstream 2.0kb downstream 8292 true Tp57577_TGAC_v2_LG4: 4156171-4164462 Trifolium pratense
Tp57577_TGAC_v2_gene19184 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 4156171-4158170 Trifolium pratense
Tp57577_TGAC_v2_gene19184 5.0kb upstream 5.0kb upstream 11292 true Tp57577_TGAC_v2_LG4: 4158171-4169462 Trifolium pratense
Tp57577_TGAC_v2_gene19184 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 4164463-4169462 Trifolium pratense
Tp57577_TGAC_v2_gene19184 5.0kb downstream 5.0kb downstream 11292 true Tp57577_TGAC_v2_LG4: 4153171-4164462 Trifolium pratense
Tp57577_TGAC_v2_gene19184 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 4153171-4158170 Trifolium pratense
Tp57577_TGAC_v2_gene19184 10.0kb upstream 10.0kb upstream 16292 true Tp57577_TGAC_v2_LG4: 4158171-4174462 Trifolium pratense
Tp57577_TGAC_v2_gene19184 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 4164463-4174462 Trifolium pratense
Tp57577_TGAC_v2_gene19184 10.0kb downstream 10.0kb downstream 16292 true Tp57577_TGAC_v2_LG4: 4148171-4164462 Trifolium pratense
Tp57577_TGAC_v2_gene19184 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 4148171-4158170 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311789 5265 Fabidae View MSA
124067534 5270 Rosid View MSA
123744941 5271 Pentapetalae View MSA
122793820 5272 Eudicot View MSA
122044869 5273 Angiosperm View MSA
121344749 5274 Embryophyte View MSA
123424102 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain