Gene : Tp57577_TGAC_v2_gene18890 T. pratense v2
Defline:  (1 of 2) PTHR11999//PTHR11999:SF92 - GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE // SUBFAMILY NOT NAMED Genomic Order:  961
Name:  ? Tp57577_TGAC_v2_gene18890 Secondary Identifier:  ? PAC:35964623
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense GLUDEG-I-PWY Trifolium pratense pathologic  
Tpratense PWY0-1305 Trifolium pratense pathologic  
Tpratense PWY-4321 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene18890 0.5kb upstream 0.5kb upstream 1491 true Tp57577_TGAC_v2_LG4: 8871183-8872673 Trifolium pratense
Tp57577_TGAC_v2_gene18890 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 8872174-8872673 Trifolium pratense
Tp57577_TGAC_v2_gene18890 0.5kb downstream 0.5kb downstream 1491 true Tp57577_TGAC_v2_LG4: 8870683-8872173 Trifolium pratense
Tp57577_TGAC_v2_gene18890 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 8870683-8871182 Trifolium pratense
Tp57577_TGAC_v2_gene18890 1.0kb upstream 1.0kb upstream 1991 true Tp57577_TGAC_v2_LG4: 8871183-8873173 Trifolium pratense
Tp57577_TGAC_v2_gene18890 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 8872174-8873173 Trifolium pratense
Tp57577_TGAC_v2_gene18890 1.0kb downstream 1.0kb downstream 1991 true Tp57577_TGAC_v2_LG4: 8870183-8872173 Trifolium pratense
Tp57577_TGAC_v2_gene18890 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 8870183-8871182 Trifolium pratense
Tp57577_TGAC_v2_gene18890 2.0kb upstream 2.0kb upstream 2991 true Tp57577_TGAC_v2_LG4: 8871183-8874173 Trifolium pratense
Tp57577_TGAC_v2_gene18890 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 8872174-8874173 Trifolium pratense
Tp57577_TGAC_v2_gene18890 2.0kb downstream 2.0kb downstream 2991 true Tp57577_TGAC_v2_LG4: 8869183-8872173 Trifolium pratense
Tp57577_TGAC_v2_gene18890 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 8869183-8871182 Trifolium pratense
Tp57577_TGAC_v2_gene18890 5.0kb upstream 5.0kb upstream 5991 true Tp57577_TGAC_v2_LG4: 8871183-8877173 Trifolium pratense
Tp57577_TGAC_v2_gene18890 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 8872174-8877173 Trifolium pratense
Tp57577_TGAC_v2_gene18890 5.0kb downstream 5.0kb downstream 5991 true Tp57577_TGAC_v2_LG4: 8866183-8872173 Trifolium pratense
Tp57577_TGAC_v2_gene18890 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 8866183-8871182 Trifolium pratense
Tp57577_TGAC_v2_gene18890 10.0kb upstream 10.0kb upstream 10991 true Tp57577_TGAC_v2_LG4: 8871183-8882173 Trifolium pratense
Tp57577_TGAC_v2_gene18890 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 8872174-8882173 Trifolium pratense
Tp57577_TGAC_v2_gene18890 10.0kb downstream 10.0kb downstream 10991 true Tp57577_TGAC_v2_LG4: 8861183-8872173 Trifolium pratense
Tp57577_TGAC_v2_gene18890 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 8861183-8871182 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122288983 5265 Fabidae View MSA
124038628 5270 Rosid View MSA
123610905 5271 Pentapetalae View MSA
122645493 5272 Eudicot View MSA
122049828 5273 Angiosperm View MSA
121311607 5274 Embryophyte View MSA
123348883 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain