Gene : Tp57577_TGAC_v2_gene18883 T. pratense v2
Defline:  (1 of 2) PTHR11999:SF113 - GLUTAMATE DECARBOXYLASE 2 Genomic Order:  962
Name:  ? Tp57577_TGAC_v2_gene18883 Secondary Identifier:  ? PAC:35963804
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense GLUDEG-I-PWY Trifolium pratense pathologic  
Tpratense PWY0-1305 Trifolium pratense pathologic  
Tpratense PWY-4321 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene18883 0.5kb upstream 0.5kb upstream 5091 true Tp57577_TGAC_v2_LG4: 8873273-8878363 Trifolium pratense
Tp57577_TGAC_v2_gene18883 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG4: 8877864-8878363 Trifolium pratense
Tp57577_TGAC_v2_gene18883 0.5kb downstream 0.5kb downstream 5091 true Tp57577_TGAC_v2_LG4: 8872773-8877863 Trifolium pratense
Tp57577_TGAC_v2_gene18883 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG4: 8872773-8873272 Trifolium pratense
Tp57577_TGAC_v2_gene18883 1.0kb upstream 1.0kb upstream 5591 true Tp57577_TGAC_v2_LG4: 8873273-8878863 Trifolium pratense
Tp57577_TGAC_v2_gene18883 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG4: 8877864-8878863 Trifolium pratense
Tp57577_TGAC_v2_gene18883 1.0kb downstream 1.0kb downstream 5591 true Tp57577_TGAC_v2_LG4: 8872273-8877863 Trifolium pratense
Tp57577_TGAC_v2_gene18883 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG4: 8872273-8873272 Trifolium pratense
Tp57577_TGAC_v2_gene18883 2.0kb upstream 2.0kb upstream 6591 true Tp57577_TGAC_v2_LG4: 8873273-8879863 Trifolium pratense
Tp57577_TGAC_v2_gene18883 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG4: 8877864-8879863 Trifolium pratense
Tp57577_TGAC_v2_gene18883 2.0kb downstream 2.0kb downstream 6591 true Tp57577_TGAC_v2_LG4: 8871273-8877863 Trifolium pratense
Tp57577_TGAC_v2_gene18883 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG4: 8871273-8873272 Trifolium pratense
Tp57577_TGAC_v2_gene18883 5.0kb upstream 5.0kb upstream 9591 true Tp57577_TGAC_v2_LG4: 8873273-8882863 Trifolium pratense
Tp57577_TGAC_v2_gene18883 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG4: 8877864-8882863 Trifolium pratense
Tp57577_TGAC_v2_gene18883 5.0kb downstream 5.0kb downstream 9591 true Tp57577_TGAC_v2_LG4: 8868273-8877863 Trifolium pratense
Tp57577_TGAC_v2_gene18883 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG4: 8868273-8873272 Trifolium pratense
Tp57577_TGAC_v2_gene18883 10.0kb upstream 10.0kb upstream 14591 true Tp57577_TGAC_v2_LG4: 8873273-8887863 Trifolium pratense
Tp57577_TGAC_v2_gene18883 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG4: 8877864-8887863 Trifolium pratense
Tp57577_TGAC_v2_gene18883 10.0kb downstream 10.0kb downstream 14591 true Tp57577_TGAC_v2_LG4: 8863273-8877863 Trifolium pratense
Tp57577_TGAC_v2_gene18883 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG4: 8863273-8873272 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309616 5265 Fabidae View MSA
124073926 5270 Rosid View MSA
123749296 5271 Pentapetalae View MSA
122788993 5272 Eudicot View MSA
122047192 5273 Angiosperm View MSA
121350824 5274 Embryophyte View MSA
123427084 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain