Gene : Tp57577_TGAC_v2_gene31479 T. pratense v2
Defline:  (1 of 1) K15430 - tRNA (guanine10-N2)-methyltransferase [EC:2.1.1.214] (TRM11, TRMT11) Genomic Order:  16
Name:  ? Tp57577_TGAC_v2_gene31479 Secondary Identifier:  ? PAC:35977777
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6829 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene31479 0.5kb upstream 0.5kb upstream 4329 true Tp57577_TGAC_v2_scaf_722: 103237-107565 Trifolium pratense
Tp57577_TGAC_v2_gene31479 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_722: 107066-107565 Trifolium pratense
Tp57577_TGAC_v2_gene31479 0.5kb downstream 0.5kb downstream 4329 true Tp57577_TGAC_v2_scaf_722: 102737-107065 Trifolium pratense
Tp57577_TGAC_v2_gene31479 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_722: 102737-103236 Trifolium pratense
Tp57577_TGAC_v2_gene31479 1.0kb upstream 1.0kb upstream 4829 true Tp57577_TGAC_v2_scaf_722: 103237-108065 Trifolium pratense
Tp57577_TGAC_v2_gene31479 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_722: 107066-108065 Trifolium pratense
Tp57577_TGAC_v2_gene31479 1.0kb downstream 1.0kb downstream 4829 true Tp57577_TGAC_v2_scaf_722: 102237-107065 Trifolium pratense
Tp57577_TGAC_v2_gene31479 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_722: 102237-103236 Trifolium pratense
Tp57577_TGAC_v2_gene31479 2.0kb upstream 2.0kb upstream 5829 true Tp57577_TGAC_v2_scaf_722: 103237-109065 Trifolium pratense
Tp57577_TGAC_v2_gene31479 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_722: 107066-109065 Trifolium pratense
Tp57577_TGAC_v2_gene31479 2.0kb downstream 2.0kb downstream 5829 true Tp57577_TGAC_v2_scaf_722: 101237-107065 Trifolium pratense
Tp57577_TGAC_v2_gene31479 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_722: 101237-103236 Trifolium pratense
Tp57577_TGAC_v2_gene31479 5.0kb upstream 5.0kb upstream 8829 true Tp57577_TGAC_v2_scaf_722: 103237-112065 Trifolium pratense
Tp57577_TGAC_v2_gene31479 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_722: 107066-112065 Trifolium pratense
Tp57577_TGAC_v2_gene31479 5.0kb downstream 5.0kb downstream 8829 true Tp57577_TGAC_v2_scaf_722: 98237-107065 Trifolium pratense
Tp57577_TGAC_v2_gene31479 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_722: 98237-103236 Trifolium pratense
Tp57577_TGAC_v2_gene31479 10.0kb upstream 10.0kb upstream 9686 true Tp57577_TGAC_v2_scaf_722: 103237-112922 Trifolium pratense
Tp57577_TGAC_v2_gene31479 10.0kb upstream 10.0kb upstream 5857 false Tp57577_TGAC_v2_scaf_722: 107066-112922 Trifolium pratense
Tp57577_TGAC_v2_gene31479 10.0kb downstream 10.0kb downstream 13829 true Tp57577_TGAC_v2_scaf_722: 93237-107065 Trifolium pratense
Tp57577_TGAC_v2_gene31479 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_722: 93237-103236 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304995 5265 Fabidae View MSA
124065317 5270 Rosid View MSA
123738561 5271 Pentapetalae View MSA
122788498 5272 Eudicot View MSA
122048014 5273 Angiosperm View MSA
121347099 5274 Embryophyte View MSA
123424311 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain