Gene : Tp57577_TGAC_v2_gene14387 T. pratense v2
Defline:  (1 of 1) PTHR11404:SF17 - SUPEROXIDE DISMUTASE [FE] 3, CHLOROPLASTIC Genomic Order:  20
Name:  ? Tp57577_TGAC_v2_gene14387 Secondary Identifier:  ? PAC:35960469
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense DETOX1-PWY Trifolium pratense pathologic  
Tpratense DETOX1-PWY-1 Trifolium pratense pathologic  
Tpratense PWY-6854 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene14387 0.5kb upstream 0.5kb upstream 4490 true Tp57577_TGAC_v2_scaf_431: 164435-168924 Trifolium pratense
Tp57577_TGAC_v2_gene14387 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_431: 164435-164934 Trifolium pratense
Tp57577_TGAC_v2_gene14387 0.5kb downstream 0.5kb downstream 4490 true Tp57577_TGAC_v2_scaf_431: 164935-169424 Trifolium pratense
Tp57577_TGAC_v2_gene14387 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_431: 168925-169424 Trifolium pratense
Tp57577_TGAC_v2_gene14387 1.0kb upstream 1.0kb upstream 4990 true Tp57577_TGAC_v2_scaf_431: 163935-168924 Trifolium pratense
Tp57577_TGAC_v2_gene14387 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_431: 163935-164934 Trifolium pratense
Tp57577_TGAC_v2_gene14387 1.0kb downstream 1.0kb downstream 4990 true Tp57577_TGAC_v2_scaf_431: 164935-169924 Trifolium pratense
Tp57577_TGAC_v2_gene14387 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_431: 168925-169924 Trifolium pratense
Tp57577_TGAC_v2_gene14387 2.0kb upstream 2.0kb upstream 5990 true Tp57577_TGAC_v2_scaf_431: 162935-168924 Trifolium pratense
Tp57577_TGAC_v2_gene14387 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_431: 162935-164934 Trifolium pratense
Tp57577_TGAC_v2_gene14387 2.0kb downstream 2.0kb downstream 5990 true Tp57577_TGAC_v2_scaf_431: 164935-170924 Trifolium pratense
Tp57577_TGAC_v2_gene14387 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_431: 168925-170924 Trifolium pratense
Tp57577_TGAC_v2_gene14387 5.0kb upstream 5.0kb upstream 8990 true Tp57577_TGAC_v2_scaf_431: 159935-168924 Trifolium pratense
Tp57577_TGAC_v2_gene14387 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_431: 159935-164934 Trifolium pratense
Tp57577_TGAC_v2_gene14387 5.0kb downstream 5.0kb downstream 8990 true Tp57577_TGAC_v2_scaf_431: 164935-173924 Trifolium pratense
Tp57577_TGAC_v2_gene14387 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_431: 168925-173924 Trifolium pratense
Tp57577_TGAC_v2_gene14387 10.0kb upstream 10.0kb upstream 13990 true Tp57577_TGAC_v2_scaf_431: 154935-168924 Trifolium pratense
Tp57577_TGAC_v2_gene14387 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_431: 154935-164934 Trifolium pratense
Tp57577_TGAC_v2_gene14387 10.0kb downstream 10.0kb downstream 13990 true Tp57577_TGAC_v2_scaf_431: 164935-178924 Trifolium pratense
Tp57577_TGAC_v2_gene14387 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_431: 168925-178924 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307249 5265 Fabidae View MSA
124067465 5270 Rosid View MSA
123740223 5271 Pentapetalae View MSA
122788752 5272 Eudicot View MSA
122044976 5273 Angiosperm View MSA
121351401 5274 Embryophyte View MSA
123425969 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain