Gene : Tp57577_TGAC_v2_gene14634 T. pratense v2
Defline:  (1 of 1) PTHR11079:SF10 - RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBD Genomic Order:  7
Name:  ? Tp57577_TGAC_v2_gene14634 Secondary Identifier:  ? PAC:35968305
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense RIBOSYN2-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene14634 0.5kb upstream 0.5kb upstream 3965 true Tp57577_TGAC_v2_scaf_462: 38587-42551 Trifolium pratense
Tp57577_TGAC_v2_gene14634 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_462: 42052-42551 Trifolium pratense
Tp57577_TGAC_v2_gene14634 0.5kb downstream 0.5kb downstream 3965 true Tp57577_TGAC_v2_scaf_462: 38087-42051 Trifolium pratense
Tp57577_TGAC_v2_gene14634 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_462: 38087-38586 Trifolium pratense
Tp57577_TGAC_v2_gene14634 1.0kb upstream 1.0kb upstream 4465 true Tp57577_TGAC_v2_scaf_462: 38587-43051 Trifolium pratense
Tp57577_TGAC_v2_gene14634 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_462: 42052-43051 Trifolium pratense
Tp57577_TGAC_v2_gene14634 1.0kb downstream 1.0kb downstream 4465 true Tp57577_TGAC_v2_scaf_462: 37587-42051 Trifolium pratense
Tp57577_TGAC_v2_gene14634 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_462: 37587-38586 Trifolium pratense
Tp57577_TGAC_v2_gene14634 2.0kb upstream 2.0kb upstream 5465 true Tp57577_TGAC_v2_scaf_462: 38587-44051 Trifolium pratense
Tp57577_TGAC_v2_gene14634 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_462: 42052-44051 Trifolium pratense
Tp57577_TGAC_v2_gene14634 2.0kb downstream 2.0kb downstream 5465 true Tp57577_TGAC_v2_scaf_462: 36587-42051 Trifolium pratense
Tp57577_TGAC_v2_gene14634 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_462: 36587-38586 Trifolium pratense
Tp57577_TGAC_v2_gene14634 5.0kb upstream 5.0kb upstream 8465 true Tp57577_TGAC_v2_scaf_462: 38587-47051 Trifolium pratense
Tp57577_TGAC_v2_gene14634 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_462: 42052-47051 Trifolium pratense
Tp57577_TGAC_v2_gene14634 5.0kb downstream 5.0kb downstream 8465 true Tp57577_TGAC_v2_scaf_462: 33587-42051 Trifolium pratense
Tp57577_TGAC_v2_gene14634 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_462: 33587-38586 Trifolium pratense
Tp57577_TGAC_v2_gene14634 10.0kb upstream 10.0kb upstream 13465 true Tp57577_TGAC_v2_scaf_462: 38587-52051 Trifolium pratense
Tp57577_TGAC_v2_gene14634 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_462: 42052-52051 Trifolium pratense
Tp57577_TGAC_v2_gene14634 10.0kb downstream 10.0kb downstream 13465 true Tp57577_TGAC_v2_scaf_462: 28587-42051 Trifolium pratense
Tp57577_TGAC_v2_gene14634 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_462: 28587-38586 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304868 5265 Fabidae View MSA
124065963 5270 Rosid View MSA
123740578 5271 Pentapetalae View MSA
122787419 5272 Eudicot View MSA
122047266 5273 Angiosperm View MSA
121347382 5274 Embryophyte View MSA
123428398 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain