Gene : Tp57577_TGAC_v2_gene30106 T. pratense v2
Defline:  (1 of 1) PTHR11468:SF4 - ALPHA-GLUCAN PHOSPHORYLASE 2, CYTOSOLIC Genomic Order:  2
Name:  ? Tp57577_TGAC_v2_gene30106 Secondary Identifier:  ? PAC:35985030
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7238 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene30106 0.5kb upstream 0.5kb upstream 7679 true Tp57577_TGAC_v2_scaf_485: 2056-9734 Trifolium pratense
Tp57577_TGAC_v2_gene30106 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_485: 2056-2555 Trifolium pratense
Tp57577_TGAC_v2_gene30106 0.5kb downstream 0.5kb downstream 7679 true Tp57577_TGAC_v2_scaf_485: 2556-10234 Trifolium pratense
Tp57577_TGAC_v2_gene30106 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_485: 9735-10234 Trifolium pratense
Tp57577_TGAC_v2_gene30106 1.0kb upstream 1.0kb upstream 8179 true Tp57577_TGAC_v2_scaf_485: 1556-9734 Trifolium pratense
Tp57577_TGAC_v2_gene30106 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_485: 1556-2555 Trifolium pratense
Tp57577_TGAC_v2_gene30106 1.0kb downstream 1.0kb downstream 8179 true Tp57577_TGAC_v2_scaf_485: 2556-10734 Trifolium pratense
Tp57577_TGAC_v2_gene30106 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_485: 9735-10734 Trifolium pratense
Tp57577_TGAC_v2_gene30106 2.0kb upstream 2.0kb upstream 9179 true Tp57577_TGAC_v2_scaf_485: 556-9734 Trifolium pratense
Tp57577_TGAC_v2_gene30106 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_485: 556-2555 Trifolium pratense
Tp57577_TGAC_v2_gene30106 2.0kb downstream 2.0kb downstream 9179 true Tp57577_TGAC_v2_scaf_485: 2556-11734 Trifolium pratense
Tp57577_TGAC_v2_gene30106 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_485: 9735-11734 Trifolium pratense
Tp57577_TGAC_v2_gene30106 5.0kb upstream 5.0kb upstream 9734 true Tp57577_TGAC_v2_scaf_485: 1-9734 Trifolium pratense
Tp57577_TGAC_v2_gene30106 5.0kb upstream 5.0kb upstream 2555 false Tp57577_TGAC_v2_scaf_485: 1-2555 Trifolium pratense
Tp57577_TGAC_v2_gene30106 5.0kb downstream 5.0kb downstream 12179 true Tp57577_TGAC_v2_scaf_485: 2556-14734 Trifolium pratense
Tp57577_TGAC_v2_gene30106 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_485: 9735-14734 Trifolium pratense
Tp57577_TGAC_v2_gene30106 10.0kb upstream 10.0kb upstream 9734 true Tp57577_TGAC_v2_scaf_485: 1-9734 Trifolium pratense
Tp57577_TGAC_v2_gene30106 10.0kb upstream 10.0kb upstream 2555 false Tp57577_TGAC_v2_scaf_485: 1-2555 Trifolium pratense
Tp57577_TGAC_v2_gene30106 10.0kb downstream 10.0kb downstream 17179 true Tp57577_TGAC_v2_scaf_485: 2556-19734 Trifolium pratense
Tp57577_TGAC_v2_gene30106 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_485: 9735-19734 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304647 5265 Fabidae View MSA
124069139 5270 Rosid View MSA
123737453 5271 Pentapetalae View MSA
122789907 5272 Eudicot View MSA
122042301 5273 Angiosperm View MSA
121351120 5274 Embryophyte View MSA
123425744 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain