Gene : Tp57577_TGAC_v2_gene30116 T. pratense v2
Defline:  (1 of 7) PF04859 - Plant protein of unknown function (DUF641) (DUF641) Genomic Order:  7
Name:  ? Tp57577_TGAC_v2_gene30116 Secondary Identifier:  ? PAC:35985036
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene30116 0.5kb upstream 0.5kb upstream 2952 true Tp57577_TGAC_v2_scaf_485: 51296-54247 Trifolium pratense
Tp57577_TGAC_v2_gene30116 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_485: 51296-51795 Trifolium pratense
Tp57577_TGAC_v2_gene30116 0.5kb downstream 0.5kb downstream 2952 true Tp57577_TGAC_v2_scaf_485: 51796-54747 Trifolium pratense
Tp57577_TGAC_v2_gene30116 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_485: 54248-54747 Trifolium pratense
Tp57577_TGAC_v2_gene30116 1.0kb upstream 1.0kb upstream 3452 true Tp57577_TGAC_v2_scaf_485: 50796-54247 Trifolium pratense
Tp57577_TGAC_v2_gene30116 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_485: 50796-51795 Trifolium pratense
Tp57577_TGAC_v2_gene30116 1.0kb downstream 1.0kb downstream 3452 true Tp57577_TGAC_v2_scaf_485: 51796-55247 Trifolium pratense
Tp57577_TGAC_v2_gene30116 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_485: 54248-55247 Trifolium pratense
Tp57577_TGAC_v2_gene30116 2.0kb upstream 2.0kb upstream 4452 true Tp57577_TGAC_v2_scaf_485: 49796-54247 Trifolium pratense
Tp57577_TGAC_v2_gene30116 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_485: 49796-51795 Trifolium pratense
Tp57577_TGAC_v2_gene30116 2.0kb downstream 2.0kb downstream 4452 true Tp57577_TGAC_v2_scaf_485: 51796-56247 Trifolium pratense
Tp57577_TGAC_v2_gene30116 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_485: 54248-56247 Trifolium pratense
Tp57577_TGAC_v2_gene30116 5.0kb upstream 5.0kb upstream 7452 true Tp57577_TGAC_v2_scaf_485: 46796-54247 Trifolium pratense
Tp57577_TGAC_v2_gene30116 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_485: 46796-51795 Trifolium pratense
Tp57577_TGAC_v2_gene30116 5.0kb downstream 5.0kb downstream 7452 true Tp57577_TGAC_v2_scaf_485: 51796-59247 Trifolium pratense
Tp57577_TGAC_v2_gene30116 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_485: 54248-59247 Trifolium pratense
Tp57577_TGAC_v2_gene30116 10.0kb upstream 10.0kb upstream 12452 true Tp57577_TGAC_v2_scaf_485: 41796-54247 Trifolium pratense
Tp57577_TGAC_v2_gene30116 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_485: 41796-51795 Trifolium pratense
Tp57577_TGAC_v2_gene30116 10.0kb downstream 10.0kb downstream 12452 true Tp57577_TGAC_v2_scaf_485: 51796-64247 Trifolium pratense
Tp57577_TGAC_v2_gene30116 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_485: 54248-64247 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026306 5273 Angiosperm View MSA
122302262 5265 Fabidae View MSA
124063821 5270 Rosid View MSA
123737629 5271 Pentapetalae View MSA
122791814 5272 Eudicot View MSA
121351018 5274 Embryophyte View MSA
123381974 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain