Gene : Tp57577_TGAC_v2_gene30120 T. pratense v2
Defline:  (1 of 2) 6.3.2.6 - Phosphoribosylaminoimidazolesuccinocarboxamide synthase / SAICARs Genomic Order:  25
Name:  ? Tp57577_TGAC_v2_gene30120 Secondary Identifier:  ? PAC:35985022
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6124 Trifolium pratense pathologic  
Tpratense PWY-841 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene30120 0.5kb upstream 0.5kb upstream 5534 true Tp57577_TGAC_v2_scaf_485: 160310-165843 Trifolium pratense
Tp57577_TGAC_v2_gene30120 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_485: 160310-160809 Trifolium pratense
Tp57577_TGAC_v2_gene30120 0.5kb downstream 0.5kb downstream 5534 true Tp57577_TGAC_v2_scaf_485: 160810-166343 Trifolium pratense
Tp57577_TGAC_v2_gene30120 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_485: 165844-166343 Trifolium pratense
Tp57577_TGAC_v2_gene30120 1.0kb upstream 1.0kb upstream 6034 true Tp57577_TGAC_v2_scaf_485: 159810-165843 Trifolium pratense
Tp57577_TGAC_v2_gene30120 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_485: 159810-160809 Trifolium pratense
Tp57577_TGAC_v2_gene30120 1.0kb downstream 1.0kb downstream 6034 true Tp57577_TGAC_v2_scaf_485: 160810-166843 Trifolium pratense
Tp57577_TGAC_v2_gene30120 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_485: 165844-166843 Trifolium pratense
Tp57577_TGAC_v2_gene30120 2.0kb upstream 2.0kb upstream 7034 true Tp57577_TGAC_v2_scaf_485: 158810-165843 Trifolium pratense
Tp57577_TGAC_v2_gene30120 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_485: 158810-160809 Trifolium pratense
Tp57577_TGAC_v2_gene30120 2.0kb downstream 2.0kb downstream 7034 true Tp57577_TGAC_v2_scaf_485: 160810-167843 Trifolium pratense
Tp57577_TGAC_v2_gene30120 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_485: 165844-167843 Trifolium pratense
Tp57577_TGAC_v2_gene30120 5.0kb upstream 5.0kb upstream 10034 true Tp57577_TGAC_v2_scaf_485: 155810-165843 Trifolium pratense
Tp57577_TGAC_v2_gene30120 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_485: 155810-160809 Trifolium pratense
Tp57577_TGAC_v2_gene30120 5.0kb downstream 5.0kb downstream 10034 true Tp57577_TGAC_v2_scaf_485: 160810-170843 Trifolium pratense
Tp57577_TGAC_v2_gene30120 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_485: 165844-170843 Trifolium pratense
Tp57577_TGAC_v2_gene30120 10.0kb upstream 10.0kb upstream 15034 true Tp57577_TGAC_v2_scaf_485: 150810-165843 Trifolium pratense
Tp57577_TGAC_v2_gene30120 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_485: 150810-160809 Trifolium pratense
Tp57577_TGAC_v2_gene30120 10.0kb downstream 10.0kb downstream 15034 true Tp57577_TGAC_v2_scaf_485: 160810-175843 Trifolium pratense
Tp57577_TGAC_v2_gene30120 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_485: 165844-175843 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301932 5265 Fabidae View MSA
124065715 5270 Rosid View MSA
123739359 5271 Pentapetalae View MSA
122791298 5272 Eudicot View MSA
122044442 5273 Angiosperm View MSA
121346335 5274 Embryophyte View MSA
123424061 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain