Gene : Tp57577_TGAC_v2_gene40407 T. pratense v2
Defline:  (1 of 2) PTHR11210//PTHR11210:SF26 - RING BOX // SUBFAMILY NOT NAMED Genomic Order:  1
Name:  ? Tp57577_TGAC_v2_gene40407 Secondary Identifier:  ? PAC:35986143
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene40407 0.5kb upstream 0.5kb upstream 1004 true Tp57577_TGAC_v2_scaf_4789: 1067-2070 Trifolium pratense
Tp57577_TGAC_v2_gene40407 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_4789: 1571-2070 Trifolium pratense
Tp57577_TGAC_v2_gene40407 0.5kb downstream 0.5kb downstream 1004 true Tp57577_TGAC_v2_scaf_4789: 567-1570 Trifolium pratense
Tp57577_TGAC_v2_gene40407 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_4789: 567-1066 Trifolium pratense
Tp57577_TGAC_v2_gene40407 1.0kb upstream 1.0kb upstream 1504 true Tp57577_TGAC_v2_scaf_4789: 1067-2570 Trifolium pratense
Tp57577_TGAC_v2_gene40407 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_4789: 1571-2570 Trifolium pratense
Tp57577_TGAC_v2_gene40407 1.0kb downstream 1.0kb downstream 1504 true Tp57577_TGAC_v2_scaf_4789: 67-1570 Trifolium pratense
Tp57577_TGAC_v2_gene40407 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_4789: 67-1066 Trifolium pratense
Tp57577_TGAC_v2_gene40407 2.0kb upstream 2.0kb upstream 1666 true Tp57577_TGAC_v2_scaf_4789: 1067-2732 Trifolium pratense
Tp57577_TGAC_v2_gene40407 2.0kb upstream 2.0kb upstream 1162 false Tp57577_TGAC_v2_scaf_4789: 1571-2732 Trifolium pratense
Tp57577_TGAC_v2_gene40407 2.0kb downstream 2.0kb downstream 1570 true Tp57577_TGAC_v2_scaf_4789: 1-1570 Trifolium pratense
Tp57577_TGAC_v2_gene40407 2.0kb downstream 2.0kb downstream 1066 false Tp57577_TGAC_v2_scaf_4789: 1-1066 Trifolium pratense
Tp57577_TGAC_v2_gene40407 5.0kb upstream 5.0kb upstream 1666 true Tp57577_TGAC_v2_scaf_4789: 1067-2732 Trifolium pratense
Tp57577_TGAC_v2_gene40407 5.0kb upstream 5.0kb upstream 1162 false Tp57577_TGAC_v2_scaf_4789: 1571-2732 Trifolium pratense
Tp57577_TGAC_v2_gene40407 5.0kb downstream 5.0kb downstream 1570 true Tp57577_TGAC_v2_scaf_4789: 1-1570 Trifolium pratense
Tp57577_TGAC_v2_gene40407 5.0kb downstream 5.0kb downstream 1066 false Tp57577_TGAC_v2_scaf_4789: 1-1066 Trifolium pratense
Tp57577_TGAC_v2_gene40407 10.0kb upstream 10.0kb upstream 1666 true Tp57577_TGAC_v2_scaf_4789: 1067-2732 Trifolium pratense
Tp57577_TGAC_v2_gene40407 10.0kb upstream 10.0kb upstream 1162 false Tp57577_TGAC_v2_scaf_4789: 1571-2732 Trifolium pratense
Tp57577_TGAC_v2_gene40407 10.0kb downstream 10.0kb downstream 1570 true Tp57577_TGAC_v2_scaf_4789: 1-1570 Trifolium pratense
Tp57577_TGAC_v2_gene40407 10.0kb downstream 10.0kb downstream 1066 false Tp57577_TGAC_v2_scaf_4789: 1-1066 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121645535 5273 Angiosperm Singleton cluster - no MSA
122284450 5265 Fabidae Singleton cluster - no MSA
124024964 5270 Rosid Singleton cluster - no MSA
123598800 5271 Pentapetalae Singleton cluster - no MSA
122633491 5272 Eudicot Singleton cluster - no MSA
120917638 5274 Embryophyte Singleton cluster - no MSA
122958287 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain