Gene : Tp57577_TGAC_v2_gene139 T. pratense v2
Defline:  (1 of 2) PTHR15371:SF1 - OUTER ENVELOPE PORE PROTEIN 16-2, CHLOROPLASTIC Genomic Order:  1
Name:  ? Tp57577_TGAC_v2_gene139 Secondary Identifier:  ? PAC:35959182
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene139 0.5kb upstream 0.5kb upstream 2119 true Tp57577_TGAC_v2_scaf_7321: 1-2119 Trifolium pratense
Tp57577_TGAC_v2_gene139 0.5kb upstream 0.5kb upstream 135 false Tp57577_TGAC_v2_scaf_7321: 1-135 Trifolium pratense
Tp57577_TGAC_v2_gene139 0.5kb downstream 0.5kb downstream 2113 true Tp57577_TGAC_v2_scaf_7321: 136-2248 Trifolium pratense
Tp57577_TGAC_v2_gene139 0.5kb downstream 0.5kb downstream 129 false Tp57577_TGAC_v2_scaf_7321: 2120-2248 Trifolium pratense
Tp57577_TGAC_v2_gene139 1.0kb upstream 1.0kb upstream 2119 true Tp57577_TGAC_v2_scaf_7321: 1-2119 Trifolium pratense
Tp57577_TGAC_v2_gene139 1.0kb upstream 1.0kb upstream 135 false Tp57577_TGAC_v2_scaf_7321: 1-135 Trifolium pratense
Tp57577_TGAC_v2_gene139 1.0kb downstream 1.0kb downstream 2113 true Tp57577_TGAC_v2_scaf_7321: 136-2248 Trifolium pratense
Tp57577_TGAC_v2_gene139 1.0kb downstream 1.0kb downstream 129 false Tp57577_TGAC_v2_scaf_7321: 2120-2248 Trifolium pratense
Tp57577_TGAC_v2_gene139 2.0kb upstream 2.0kb upstream 2119 true Tp57577_TGAC_v2_scaf_7321: 1-2119 Trifolium pratense
Tp57577_TGAC_v2_gene139 2.0kb upstream 2.0kb upstream 135 false Tp57577_TGAC_v2_scaf_7321: 1-135 Trifolium pratense
Tp57577_TGAC_v2_gene139 2.0kb downstream 2.0kb downstream 2113 true Tp57577_TGAC_v2_scaf_7321: 136-2248 Trifolium pratense
Tp57577_TGAC_v2_gene139 2.0kb downstream 2.0kb downstream 129 false Tp57577_TGAC_v2_scaf_7321: 2120-2248 Trifolium pratense
Tp57577_TGAC_v2_gene139 5.0kb upstream 5.0kb upstream 2119 true Tp57577_TGAC_v2_scaf_7321: 1-2119 Trifolium pratense
Tp57577_TGAC_v2_gene139 5.0kb upstream 5.0kb upstream 135 false Tp57577_TGAC_v2_scaf_7321: 1-135 Trifolium pratense
Tp57577_TGAC_v2_gene139 5.0kb downstream 5.0kb downstream 2113 true Tp57577_TGAC_v2_scaf_7321: 136-2248 Trifolium pratense
Tp57577_TGAC_v2_gene139 5.0kb downstream 5.0kb downstream 129 false Tp57577_TGAC_v2_scaf_7321: 2120-2248 Trifolium pratense
Tp57577_TGAC_v2_gene139 10.0kb upstream 10.0kb upstream 2119 true Tp57577_TGAC_v2_scaf_7321: 1-2119 Trifolium pratense
Tp57577_TGAC_v2_gene139 10.0kb upstream 10.0kb upstream 135 false Tp57577_TGAC_v2_scaf_7321: 1-135 Trifolium pratense
Tp57577_TGAC_v2_gene139 10.0kb downstream 10.0kb downstream 2113 true Tp57577_TGAC_v2_scaf_7321: 136-2248 Trifolium pratense
Tp57577_TGAC_v2_gene139 10.0kb downstream 10.0kb downstream 129 false Tp57577_TGAC_v2_scaf_7321: 2120-2248 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311565 5265 Fabidae View MSA
124062569 5270 Rosid View MSA
123744668 5271 Pentapetalae View MSA
122786883 5272 Eudicot View MSA
122042024 5273 Angiosperm View MSA
121351081 5274 Embryophyte View MSA
123382000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain