Gene : Tp57577_TGAC_v2_gene8711 T. pratense v2
Defline:  (1 of 1) K00814 - alanine transaminase (GPT, ALT) Genomic Order:  13
Name:  ? Tp57577_TGAC_v2_gene8711 Secondary Identifier:  ? PAC:35977147
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense ALANINE-DEG3-PWY Trifolium pratense pathologic  
Tpratense ALANINE-SYN2-PWY Trifolium pratense pathologic  
Tpratense PWY-7115 Trifolium pratense pathologic  
Tpratense PWY-7117 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene8711 0.5kb upstream 0.5kb upstream 11159 true Tp57577_TGAC_v2_scaf_515: 150276-161434 Trifolium pratense
Tp57577_TGAC_v2_gene8711 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_515: 150276-150775 Trifolium pratense
Tp57577_TGAC_v2_gene8711 0.5kb downstream 0.5kb downstream 11159 true Tp57577_TGAC_v2_scaf_515: 150776-161934 Trifolium pratense
Tp57577_TGAC_v2_gene8711 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_515: 161435-161934 Trifolium pratense
Tp57577_TGAC_v2_gene8711 1.0kb upstream 1.0kb upstream 11659 true Tp57577_TGAC_v2_scaf_515: 149776-161434 Trifolium pratense
Tp57577_TGAC_v2_gene8711 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_515: 149776-150775 Trifolium pratense
Tp57577_TGAC_v2_gene8711 1.0kb downstream 1.0kb downstream 11659 true Tp57577_TGAC_v2_scaf_515: 150776-162434 Trifolium pratense
Tp57577_TGAC_v2_gene8711 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_515: 161435-162434 Trifolium pratense
Tp57577_TGAC_v2_gene8711 2.0kb upstream 2.0kb upstream 12659 true Tp57577_TGAC_v2_scaf_515: 148776-161434 Trifolium pratense
Tp57577_TGAC_v2_gene8711 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_515: 148776-150775 Trifolium pratense
Tp57577_TGAC_v2_gene8711 2.0kb downstream 2.0kb downstream 12659 true Tp57577_TGAC_v2_scaf_515: 150776-163434 Trifolium pratense
Tp57577_TGAC_v2_gene8711 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_515: 161435-163434 Trifolium pratense
Tp57577_TGAC_v2_gene8711 5.0kb upstream 5.0kb upstream 15659 true Tp57577_TGAC_v2_scaf_515: 145776-161434 Trifolium pratense
Tp57577_TGAC_v2_gene8711 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_515: 145776-150775 Trifolium pratense
Tp57577_TGAC_v2_gene8711 5.0kb downstream 5.0kb downstream 15659 true Tp57577_TGAC_v2_scaf_515: 150776-166434 Trifolium pratense
Tp57577_TGAC_v2_gene8711 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_515: 161435-166434 Trifolium pratense
Tp57577_TGAC_v2_gene8711 10.0kb upstream 10.0kb upstream 20659 true Tp57577_TGAC_v2_scaf_515: 140776-161434 Trifolium pratense
Tp57577_TGAC_v2_gene8711 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_515: 140776-150775 Trifolium pratense
Tp57577_TGAC_v2_gene8711 10.0kb downstream 10.0kb downstream 20659 true Tp57577_TGAC_v2_scaf_515: 150776-171434 Trifolium pratense
Tp57577_TGAC_v2_gene8711 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_515: 161435-171434 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301805 5265 Fabidae View MSA
124064256 5270 Rosid View MSA
123749170 5271 Pentapetalae View MSA
122793882 5272 Eudicot View MSA
122043472 5273 Angiosperm View MSA
121347513 5274 Embryophyte View MSA
123427750 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain