Gene : Tp57577_TGAC_v2_gene9773 T. pratense v2
Defline:  (1 of 6) PTHR10052 - 60S RIBOSOMAL PROTEIN L18A Genomic Order:  3
Name:  ? Tp57577_TGAC_v2_gene9773 Secondary Identifier:  ? PAC:35985440
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene9773 0.5kb upstream 0.5kb upstream 3890 true Tp57577_TGAC_v2_scaf_503: 19066-22955 Trifolium pratense
Tp57577_TGAC_v2_gene9773 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_503: 22456-22955 Trifolium pratense
Tp57577_TGAC_v2_gene9773 0.5kb downstream 0.5kb downstream 3890 true Tp57577_TGAC_v2_scaf_503: 18566-22455 Trifolium pratense
Tp57577_TGAC_v2_gene9773 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_503: 18566-19065 Trifolium pratense
Tp57577_TGAC_v2_gene9773 1.0kb upstream 1.0kb upstream 4390 true Tp57577_TGAC_v2_scaf_503: 19066-23455 Trifolium pratense
Tp57577_TGAC_v2_gene9773 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_503: 22456-23455 Trifolium pratense
Tp57577_TGAC_v2_gene9773 1.0kb downstream 1.0kb downstream 4390 true Tp57577_TGAC_v2_scaf_503: 18066-22455 Trifolium pratense
Tp57577_TGAC_v2_gene9773 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_503: 18066-19065 Trifolium pratense
Tp57577_TGAC_v2_gene9773 2.0kb upstream 2.0kb upstream 5390 true Tp57577_TGAC_v2_scaf_503: 19066-24455 Trifolium pratense
Tp57577_TGAC_v2_gene9773 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_503: 22456-24455 Trifolium pratense
Tp57577_TGAC_v2_gene9773 2.0kb downstream 2.0kb downstream 5390 true Tp57577_TGAC_v2_scaf_503: 17066-22455 Trifolium pratense
Tp57577_TGAC_v2_gene9773 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_503: 17066-19065 Trifolium pratense
Tp57577_TGAC_v2_gene9773 5.0kb upstream 5.0kb upstream 8390 true Tp57577_TGAC_v2_scaf_503: 19066-27455 Trifolium pratense
Tp57577_TGAC_v2_gene9773 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_503: 22456-27455 Trifolium pratense
Tp57577_TGAC_v2_gene9773 5.0kb downstream 5.0kb downstream 8390 true Tp57577_TGAC_v2_scaf_503: 14066-22455 Trifolium pratense
Tp57577_TGAC_v2_gene9773 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_503: 14066-19065 Trifolium pratense
Tp57577_TGAC_v2_gene9773 10.0kb upstream 10.0kb upstream 13390 true Tp57577_TGAC_v2_scaf_503: 19066-32455 Trifolium pratense
Tp57577_TGAC_v2_gene9773 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_503: 22456-32455 Trifolium pratense
Tp57577_TGAC_v2_gene9773 10.0kb downstream 10.0kb downstream 13390 true Tp57577_TGAC_v2_scaf_503: 9066-22455 Trifolium pratense
Tp57577_TGAC_v2_gene9773 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_503: 9066-19065 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027441 5273 Angiosperm View MSA
122307579 5265 Fabidae View MSA
124063459 5270 Rosid View MSA
123745455 5271 Pentapetalae View MSA
122796236 5272 Eudicot View MSA
121350597 5274 Embryophyte View MSA
123425775 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain