Gene : Tp57577_TGAC_v2_gene23079 T. pratense v2
Defline:  (1 of 2) K00550 - methylene-fatty-acyl-phospholipid synthase (OPI3) Genomic Order:  4
Name:  ? Tp57577_TGAC_v2_gene23079 Secondary Identifier:  ? PAC:35982477
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene23079 0.5kb upstream 0.5kb upstream 2924 true Tp57577_TGAC_v2_scaf_998: 18355-21278 Trifolium pratense
Tp57577_TGAC_v2_gene23079 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_998: 18355-18854 Trifolium pratense
Tp57577_TGAC_v2_gene23079 0.5kb downstream 0.5kb downstream 2924 true Tp57577_TGAC_v2_scaf_998: 18855-21778 Trifolium pratense
Tp57577_TGAC_v2_gene23079 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_998: 21279-21778 Trifolium pratense
Tp57577_TGAC_v2_gene23079 1.0kb upstream 1.0kb upstream 3424 true Tp57577_TGAC_v2_scaf_998: 17855-21278 Trifolium pratense
Tp57577_TGAC_v2_gene23079 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_998: 17855-18854 Trifolium pratense
Tp57577_TGAC_v2_gene23079 1.0kb downstream 1.0kb downstream 3424 true Tp57577_TGAC_v2_scaf_998: 18855-22278 Trifolium pratense
Tp57577_TGAC_v2_gene23079 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_998: 21279-22278 Trifolium pratense
Tp57577_TGAC_v2_gene23079 2.0kb upstream 2.0kb upstream 4424 true Tp57577_TGAC_v2_scaf_998: 16855-21278 Trifolium pratense
Tp57577_TGAC_v2_gene23079 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_998: 16855-18854 Trifolium pratense
Tp57577_TGAC_v2_gene23079 2.0kb downstream 2.0kb downstream 4424 true Tp57577_TGAC_v2_scaf_998: 18855-23278 Trifolium pratense
Tp57577_TGAC_v2_gene23079 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_998: 21279-23278 Trifolium pratense
Tp57577_TGAC_v2_gene23079 5.0kb upstream 5.0kb upstream 7424 true Tp57577_TGAC_v2_scaf_998: 13855-21278 Trifolium pratense
Tp57577_TGAC_v2_gene23079 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_998: 13855-18854 Trifolium pratense
Tp57577_TGAC_v2_gene23079 5.0kb downstream 5.0kb downstream 7424 true Tp57577_TGAC_v2_scaf_998: 18855-26278 Trifolium pratense
Tp57577_TGAC_v2_gene23079 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_998: 21279-26278 Trifolium pratense
Tp57577_TGAC_v2_gene23079 10.0kb upstream 10.0kb upstream 12424 true Tp57577_TGAC_v2_scaf_998: 8855-21278 Trifolium pratense
Tp57577_TGAC_v2_gene23079 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_998: 8855-18854 Trifolium pratense
Tp57577_TGAC_v2_gene23079 10.0kb downstream 10.0kb downstream 12424 true Tp57577_TGAC_v2_scaf_998: 18855-31278 Trifolium pratense
Tp57577_TGAC_v2_gene23079 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_998: 21279-31278 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299559 5265 Fabidae View MSA
124050181 5270 Rosid View MSA
123739320 5271 Pentapetalae View MSA
122789199 5272 Eudicot View MSA
122050083 5273 Angiosperm View MSA
121351589 5274 Embryophyte View MSA
123424065 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain