Gene : Tp57577_TGAC_v2_gene28127 T. pratense v2
Defline:  (1 of 2) PTHR11570:SF1 - S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME Genomic Order:  7
Name:  ? Tp57577_TGAC_v2_gene28127 Secondary Identifier:  ? PAC:35953457
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense ARGSPECAT-PWY Trifolium pratense pathologic  
Tpratense BSUBPOLYAMSYN-PWY Trifolium pratense pathologic  
Tpratense POLYAMINSYN3-PWY Trifolium pratense pathologic  
Tpratense PWY-7528 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene28127 0.5kb upstream 0.5kb upstream 2489 true Tp57577_TGAC_v2_scaf_893: 40607-43095 Trifolium pratense
Tp57577_TGAC_v2_gene28127 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_893: 42596-43095 Trifolium pratense
Tp57577_TGAC_v2_gene28127 0.5kb downstream 0.5kb downstream 2489 true Tp57577_TGAC_v2_scaf_893: 40107-42595 Trifolium pratense
Tp57577_TGAC_v2_gene28127 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_893: 40107-40606 Trifolium pratense
Tp57577_TGAC_v2_gene28127 1.0kb upstream 1.0kb upstream 2989 true Tp57577_TGAC_v2_scaf_893: 40607-43595 Trifolium pratense
Tp57577_TGAC_v2_gene28127 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_893: 42596-43595 Trifolium pratense
Tp57577_TGAC_v2_gene28127 1.0kb downstream 1.0kb downstream 2989 true Tp57577_TGAC_v2_scaf_893: 39607-42595 Trifolium pratense
Tp57577_TGAC_v2_gene28127 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_893: 39607-40606 Trifolium pratense
Tp57577_TGAC_v2_gene28127 2.0kb upstream 2.0kb upstream 3989 true Tp57577_TGAC_v2_scaf_893: 40607-44595 Trifolium pratense
Tp57577_TGAC_v2_gene28127 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_893: 42596-44595 Trifolium pratense
Tp57577_TGAC_v2_gene28127 2.0kb downstream 2.0kb downstream 3989 true Tp57577_TGAC_v2_scaf_893: 38607-42595 Trifolium pratense
Tp57577_TGAC_v2_gene28127 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_893: 38607-40606 Trifolium pratense
Tp57577_TGAC_v2_gene28127 5.0kb upstream 5.0kb upstream 6989 true Tp57577_TGAC_v2_scaf_893: 40607-47595 Trifolium pratense
Tp57577_TGAC_v2_gene28127 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_893: 42596-47595 Trifolium pratense
Tp57577_TGAC_v2_gene28127 5.0kb downstream 5.0kb downstream 6989 true Tp57577_TGAC_v2_scaf_893: 35607-42595 Trifolium pratense
Tp57577_TGAC_v2_gene28127 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_893: 35607-40606 Trifolium pratense
Tp57577_TGAC_v2_gene28127 10.0kb upstream 10.0kb upstream 11989 true Tp57577_TGAC_v2_scaf_893: 40607-52595 Trifolium pratense
Tp57577_TGAC_v2_gene28127 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_893: 42596-52595 Trifolium pratense
Tp57577_TGAC_v2_gene28127 10.0kb downstream 10.0kb downstream 11989 true Tp57577_TGAC_v2_scaf_893: 30607-42595 Trifolium pratense
Tp57577_TGAC_v2_gene28127 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_893: 30607-40606 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310071 5265 Fabidae View MSA
124061070 5270 Rosid View MSA
123751266 5271 Pentapetalae View MSA
122795098 5272 Eudicot View MSA
122049143 5273 Angiosperm View MSA
121348944 5274 Embryophyte View MSA
123423800 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain