Gene : Tp57577_TGAC_v2_gene29099 T. pratense v2
Defline:  (1 of 2) K01866 - tyrosyl-tRNA synthetase (YARS, tyrS) Genomic Order:  7
Name:  ? Tp57577_TGAC_v2_gene29099 Secondary Identifier:  ? PAC:35973714
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense TRNA-CHARGING-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene29099 0.5kb upstream 0.5kb upstream 4738 true Tp57577_TGAC_v2_scaf_824: 65938-70675 Trifolium pratense
Tp57577_TGAC_v2_gene29099 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_824: 70176-70675 Trifolium pratense
Tp57577_TGAC_v2_gene29099 0.5kb downstream 0.5kb downstream 4738 true Tp57577_TGAC_v2_scaf_824: 65438-70175 Trifolium pratense
Tp57577_TGAC_v2_gene29099 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_824: 65438-65937 Trifolium pratense
Tp57577_TGAC_v2_gene29099 1.0kb upstream 1.0kb upstream 5238 true Tp57577_TGAC_v2_scaf_824: 65938-71175 Trifolium pratense
Tp57577_TGAC_v2_gene29099 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_824: 70176-71175 Trifolium pratense
Tp57577_TGAC_v2_gene29099 1.0kb downstream 1.0kb downstream 5238 true Tp57577_TGAC_v2_scaf_824: 64938-70175 Trifolium pratense
Tp57577_TGAC_v2_gene29099 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_824: 64938-65937 Trifolium pratense
Tp57577_TGAC_v2_gene29099 2.0kb upstream 2.0kb upstream 6238 true Tp57577_TGAC_v2_scaf_824: 65938-72175 Trifolium pratense
Tp57577_TGAC_v2_gene29099 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_824: 70176-72175 Trifolium pratense
Tp57577_TGAC_v2_gene29099 2.0kb downstream 2.0kb downstream 6238 true Tp57577_TGAC_v2_scaf_824: 63938-70175 Trifolium pratense
Tp57577_TGAC_v2_gene29099 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_824: 63938-65937 Trifolium pratense
Tp57577_TGAC_v2_gene29099 5.0kb upstream 5.0kb upstream 9238 true Tp57577_TGAC_v2_scaf_824: 65938-75175 Trifolium pratense
Tp57577_TGAC_v2_gene29099 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_824: 70176-75175 Trifolium pratense
Tp57577_TGAC_v2_gene29099 5.0kb downstream 5.0kb downstream 9238 true Tp57577_TGAC_v2_scaf_824: 60938-70175 Trifolium pratense
Tp57577_TGAC_v2_gene29099 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_824: 60938-65937 Trifolium pratense
Tp57577_TGAC_v2_gene29099 10.0kb upstream 10.0kb upstream 14238 true Tp57577_TGAC_v2_scaf_824: 65938-80175 Trifolium pratense
Tp57577_TGAC_v2_gene29099 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_824: 70176-80175 Trifolium pratense
Tp57577_TGAC_v2_gene29099 10.0kb downstream 10.0kb downstream 14238 true Tp57577_TGAC_v2_scaf_824: 55938-70175 Trifolium pratense
Tp57577_TGAC_v2_gene29099 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_824: 55938-65937 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041140 5273 Angiosperm View MSA
122300675 5265 Fabidae View MSA
124067853 5270 Rosid View MSA
123747436 5271 Pentapetalae View MSA
122790144 5272 Eudicot View MSA
121344192 5274 Embryophyte View MSA
123424631 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain