Gene : Tp57577_TGAC_v2_gene3680 T. pratense v2
Defline:  (1 of 1) K08343 - ubiquitin-like-conjugating enzyme ATG3 (ATG3) Genomic Order:  34
Name:  ? Tp57577_TGAC_v2_gene3680 Secondary Identifier:  ? PAC:35962018
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene3680 0.5kb upstream 0.5kb upstream 4963 true Tp57577_TGAC_v2_scaf_84: 396572-401534 Trifolium pratense
Tp57577_TGAC_v2_gene3680 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_84: 401035-401534 Trifolium pratense
Tp57577_TGAC_v2_gene3680 0.5kb downstream 0.5kb downstream 4963 true Tp57577_TGAC_v2_scaf_84: 396072-401034 Trifolium pratense
Tp57577_TGAC_v2_gene3680 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_84: 396072-396571 Trifolium pratense
Tp57577_TGAC_v2_gene3680 1.0kb upstream 1.0kb upstream 5463 true Tp57577_TGAC_v2_scaf_84: 396572-402034 Trifolium pratense
Tp57577_TGAC_v2_gene3680 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_84: 401035-402034 Trifolium pratense
Tp57577_TGAC_v2_gene3680 1.0kb downstream 1.0kb downstream 5463 true Tp57577_TGAC_v2_scaf_84: 395572-401034 Trifolium pratense
Tp57577_TGAC_v2_gene3680 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_84: 395572-396571 Trifolium pratense
Tp57577_TGAC_v2_gene3680 2.0kb upstream 2.0kb upstream 6463 true Tp57577_TGAC_v2_scaf_84: 396572-403034 Trifolium pratense
Tp57577_TGAC_v2_gene3680 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_84: 401035-403034 Trifolium pratense
Tp57577_TGAC_v2_gene3680 2.0kb downstream 2.0kb downstream 6463 true Tp57577_TGAC_v2_scaf_84: 394572-401034 Trifolium pratense
Tp57577_TGAC_v2_gene3680 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_84: 394572-396571 Trifolium pratense
Tp57577_TGAC_v2_gene3680 5.0kb upstream 5.0kb upstream 9463 true Tp57577_TGAC_v2_scaf_84: 396572-406034 Trifolium pratense
Tp57577_TGAC_v2_gene3680 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_84: 401035-406034 Trifolium pratense
Tp57577_TGAC_v2_gene3680 5.0kb downstream 5.0kb downstream 9463 true Tp57577_TGAC_v2_scaf_84: 391572-401034 Trifolium pratense
Tp57577_TGAC_v2_gene3680 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_84: 391572-396571 Trifolium pratense
Tp57577_TGAC_v2_gene3680 10.0kb upstream 10.0kb upstream 14463 true Tp57577_TGAC_v2_scaf_84: 396572-411034 Trifolium pratense
Tp57577_TGAC_v2_gene3680 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_84: 401035-411034 Trifolium pratense
Tp57577_TGAC_v2_gene3680 10.0kb downstream 10.0kb downstream 14463 true Tp57577_TGAC_v2_scaf_84: 386572-401034 Trifolium pratense
Tp57577_TGAC_v2_gene3680 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_84: 386572-396571 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299719 5265 Fabidae View MSA
124064028 5270 Rosid View MSA
123743996 5271 Pentapetalae View MSA
122789041 5272 Eudicot View MSA
122041877 5273 Angiosperm View MSA
121349462 5274 Embryophyte View MSA
123426307 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain