Gene : Tp57577_TGAC_v2_gene3645 T. pratense v2
Defline:  (1 of 1) KOG4443 - Putative transcription factor HALR/MLL3, involved in embryonic development Genomic Order:  8
Name:  ? Tp57577_TGAC_v2_gene3645 Secondary Identifier:  ? PAC:35962007
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene3645 0.5kb upstream 0.5kb upstream 8229 true Tp57577_TGAC_v2_scaf_84: 41207-49435 Trifolium pratense
Tp57577_TGAC_v2_gene3645 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_84: 48936-49435 Trifolium pratense
Tp57577_TGAC_v2_gene3645 0.5kb downstream 0.5kb downstream 8229 true Tp57577_TGAC_v2_scaf_84: 40707-48935 Trifolium pratense
Tp57577_TGAC_v2_gene3645 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_84: 40707-41206 Trifolium pratense
Tp57577_TGAC_v2_gene3645 1.0kb upstream 1.0kb upstream 8729 true Tp57577_TGAC_v2_scaf_84: 41207-49935 Trifolium pratense
Tp57577_TGAC_v2_gene3645 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_84: 48936-49935 Trifolium pratense
Tp57577_TGAC_v2_gene3645 1.0kb downstream 1.0kb downstream 8729 true Tp57577_TGAC_v2_scaf_84: 40207-48935 Trifolium pratense
Tp57577_TGAC_v2_gene3645 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_84: 40207-41206 Trifolium pratense
Tp57577_TGAC_v2_gene3645 2.0kb upstream 2.0kb upstream 9729 true Tp57577_TGAC_v2_scaf_84: 41207-50935 Trifolium pratense
Tp57577_TGAC_v2_gene3645 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_84: 48936-50935 Trifolium pratense
Tp57577_TGAC_v2_gene3645 2.0kb downstream 2.0kb downstream 9729 true Tp57577_TGAC_v2_scaf_84: 39207-48935 Trifolium pratense
Tp57577_TGAC_v2_gene3645 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_84: 39207-41206 Trifolium pratense
Tp57577_TGAC_v2_gene3645 5.0kb upstream 5.0kb upstream 12729 true Tp57577_TGAC_v2_scaf_84: 41207-53935 Trifolium pratense
Tp57577_TGAC_v2_gene3645 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_84: 48936-53935 Trifolium pratense
Tp57577_TGAC_v2_gene3645 5.0kb downstream 5.0kb downstream 12729 true Tp57577_TGAC_v2_scaf_84: 36207-48935 Trifolium pratense
Tp57577_TGAC_v2_gene3645 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_84: 36207-41206 Trifolium pratense
Tp57577_TGAC_v2_gene3645 10.0kb upstream 10.0kb upstream 17729 true Tp57577_TGAC_v2_scaf_84: 41207-58935 Trifolium pratense
Tp57577_TGAC_v2_gene3645 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_84: 48936-58935 Trifolium pratense
Tp57577_TGAC_v2_gene3645 10.0kb downstream 10.0kb downstream 17729 true Tp57577_TGAC_v2_scaf_84: 31207-48935 Trifolium pratense
Tp57577_TGAC_v2_gene3645 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_84: 31207-41206 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301479 5265 Fabidae View MSA
124064827 5270 Rosid View MSA
123748357 5271 Pentapetalae View MSA
122789361 5272 Eudicot View MSA
122043559 5273 Angiosperm View MSA
121347364 5274 Embryophyte View MSA
123380534 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain