Gene : Tp57577_TGAC_v2_gene29157 T. pratense v2
Defline:  (1 of 1) PF02068 - Plant PEC family metallothionein (Metallothio_PEC) Genomic Order:  13
Name:  ? Tp57577_TGAC_v2_gene29157 Secondary Identifier:  ? PAC:35986173
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene29157 0.5kb upstream 0.5kb upstream 1621 true Tp57577_TGAC_v2_scaf_827: 59270-60890 Trifolium pratense
Tp57577_TGAC_v2_gene29157 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_827: 59270-59769 Trifolium pratense
Tp57577_TGAC_v2_gene29157 0.5kb downstream 0.5kb downstream 1621 true Tp57577_TGAC_v2_scaf_827: 59770-61390 Trifolium pratense
Tp57577_TGAC_v2_gene29157 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_827: 60891-61390 Trifolium pratense
Tp57577_TGAC_v2_gene29157 1.0kb upstream 1.0kb upstream 2121 true Tp57577_TGAC_v2_scaf_827: 58770-60890 Trifolium pratense
Tp57577_TGAC_v2_gene29157 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_827: 58770-59769 Trifolium pratense
Tp57577_TGAC_v2_gene29157 1.0kb downstream 1.0kb downstream 2121 true Tp57577_TGAC_v2_scaf_827: 59770-61890 Trifolium pratense
Tp57577_TGAC_v2_gene29157 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_827: 60891-61890 Trifolium pratense
Tp57577_TGAC_v2_gene29157 2.0kb upstream 2.0kb upstream 3121 true Tp57577_TGAC_v2_scaf_827: 57770-60890 Trifolium pratense
Tp57577_TGAC_v2_gene29157 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_827: 57770-59769 Trifolium pratense
Tp57577_TGAC_v2_gene29157 2.0kb downstream 2.0kb downstream 3121 true Tp57577_TGAC_v2_scaf_827: 59770-62890 Trifolium pratense
Tp57577_TGAC_v2_gene29157 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_827: 60891-62890 Trifolium pratense
Tp57577_TGAC_v2_gene29157 5.0kb upstream 5.0kb upstream 6121 true Tp57577_TGAC_v2_scaf_827: 54770-60890 Trifolium pratense
Tp57577_TGAC_v2_gene29157 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_827: 54770-59769 Trifolium pratense
Tp57577_TGAC_v2_gene29157 5.0kb downstream 5.0kb downstream 6121 true Tp57577_TGAC_v2_scaf_827: 59770-65890 Trifolium pratense
Tp57577_TGAC_v2_gene29157 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_827: 60891-65890 Trifolium pratense
Tp57577_TGAC_v2_gene29157 10.0kb upstream 10.0kb upstream 11121 true Tp57577_TGAC_v2_scaf_827: 49770-60890 Trifolium pratense
Tp57577_TGAC_v2_gene29157 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_827: 49770-59769 Trifolium pratense
Tp57577_TGAC_v2_gene29157 10.0kb downstream 10.0kb downstream 11121 true Tp57577_TGAC_v2_scaf_827: 59770-70890 Trifolium pratense
Tp57577_TGAC_v2_gene29157 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_827: 60891-70890 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026261 5273 Angiosperm View MSA
122308422 5265 Fabidae View MSA
124050513 5270 Rosid View MSA
123739681 5271 Pentapetalae View MSA
122790496 5272 Eudicot View MSA
121296251 5274 Embryophyte View MSA
123334448 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain