Gene : Tp57577_TGAC_v2_gene30407 T. pratense v2
Defline:  (1 of 2) K11292 - transcription elongation factor SPT6 (SUPT6H, SPT6) Genomic Order:  6
Name:  ? Tp57577_TGAC_v2_gene30407 Secondary Identifier:  ? PAC:35960127
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene30407 0.5kb upstream 0.5kb upstream 12247 true Tp57577_TGAC_v2_scaf_748: 40716-52962 Trifolium pratense
Tp57577_TGAC_v2_gene30407 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_748: 40716-41215 Trifolium pratense
Tp57577_TGAC_v2_gene30407 0.5kb downstream 0.5kb downstream 12247 true Tp57577_TGAC_v2_scaf_748: 41216-53462 Trifolium pratense
Tp57577_TGAC_v2_gene30407 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_748: 52963-53462 Trifolium pratense
Tp57577_TGAC_v2_gene30407 1.0kb upstream 1.0kb upstream 12747 true Tp57577_TGAC_v2_scaf_748: 40216-52962 Trifolium pratense
Tp57577_TGAC_v2_gene30407 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_748: 40216-41215 Trifolium pratense
Tp57577_TGAC_v2_gene30407 1.0kb downstream 1.0kb downstream 12747 true Tp57577_TGAC_v2_scaf_748: 41216-53962 Trifolium pratense
Tp57577_TGAC_v2_gene30407 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_748: 52963-53962 Trifolium pratense
Tp57577_TGAC_v2_gene30407 2.0kb upstream 2.0kb upstream 13747 true Tp57577_TGAC_v2_scaf_748: 39216-52962 Trifolium pratense
Tp57577_TGAC_v2_gene30407 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_748: 39216-41215 Trifolium pratense
Tp57577_TGAC_v2_gene30407 2.0kb downstream 2.0kb downstream 13747 true Tp57577_TGAC_v2_scaf_748: 41216-54962 Trifolium pratense
Tp57577_TGAC_v2_gene30407 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_748: 52963-54962 Trifolium pratense
Tp57577_TGAC_v2_gene30407 5.0kb upstream 5.0kb upstream 16747 true Tp57577_TGAC_v2_scaf_748: 36216-52962 Trifolium pratense
Tp57577_TGAC_v2_gene30407 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_748: 36216-41215 Trifolium pratense
Tp57577_TGAC_v2_gene30407 5.0kb downstream 5.0kb downstream 16747 true Tp57577_TGAC_v2_scaf_748: 41216-57962 Trifolium pratense
Tp57577_TGAC_v2_gene30407 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_748: 52963-57962 Trifolium pratense
Tp57577_TGAC_v2_gene30407 10.0kb upstream 10.0kb upstream 21747 true Tp57577_TGAC_v2_scaf_748: 31216-52962 Trifolium pratense
Tp57577_TGAC_v2_gene30407 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_748: 31216-41215 Trifolium pratense
Tp57577_TGAC_v2_gene30407 10.0kb downstream 10.0kb downstream 21747 true Tp57577_TGAC_v2_scaf_748: 41216-62962 Trifolium pratense
Tp57577_TGAC_v2_gene30407 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_748: 52963-62962 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307042 5265 Fabidae View MSA
124072790 5270 Rosid View MSA
123737056 5271 Pentapetalae View MSA
122788563 5272 Eudicot View MSA
122044627 5273 Angiosperm View MSA
121347900 5274 Embryophyte View MSA
123426736 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain