Gene : Tp57577_TGAC_v2_gene1595 T. pratense v2
Defline:  (1 of 1) PTHR10836//PTHR10836:SF46 - GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE // SUBFAMILY NOT NAMED Genomic Order:  26
Name:  ? Tp57577_TGAC_v2_gene1595 Secondary Identifier:  ? PAC:35952592
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense ANAEROFRUCAT-PWY Trifolium pratense pathologic  
Tpratense ANAGLYCOLYSIS-PWY Trifolium pratense pathologic  
Tpratense GLUCONEO-PWY Trifolium pratense pathologic  
Tpratense PWY-1042 Trifolium pratense pathologic  
Tpratense PWY-5464 Trifolium pratense pathologic  
Tpratense SUCSYN-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene1595 0.5kb upstream 0.5kb upstream 9996 true Tp57577_TGAC_v2_scaf_74: 241571-251566 Trifolium pratense
Tp57577_TGAC_v2_gene1595 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_74: 241571-242070 Trifolium pratense
Tp57577_TGAC_v2_gene1595 0.5kb downstream 0.5kb downstream 9996 true Tp57577_TGAC_v2_scaf_74: 242071-252066 Trifolium pratense
Tp57577_TGAC_v2_gene1595 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_74: 251567-252066 Trifolium pratense
Tp57577_TGAC_v2_gene1595 1.0kb upstream 1.0kb upstream 10496 true Tp57577_TGAC_v2_scaf_74: 241071-251566 Trifolium pratense
Tp57577_TGAC_v2_gene1595 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_74: 241071-242070 Trifolium pratense
Tp57577_TGAC_v2_gene1595 1.0kb downstream 1.0kb downstream 10496 true Tp57577_TGAC_v2_scaf_74: 242071-252566 Trifolium pratense
Tp57577_TGAC_v2_gene1595 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_74: 251567-252566 Trifolium pratense
Tp57577_TGAC_v2_gene1595 2.0kb upstream 2.0kb upstream 11496 true Tp57577_TGAC_v2_scaf_74: 240071-251566 Trifolium pratense
Tp57577_TGAC_v2_gene1595 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_74: 240071-242070 Trifolium pratense
Tp57577_TGAC_v2_gene1595 2.0kb downstream 2.0kb downstream 11496 true Tp57577_TGAC_v2_scaf_74: 242071-253566 Trifolium pratense
Tp57577_TGAC_v2_gene1595 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_74: 251567-253566 Trifolium pratense
Tp57577_TGAC_v2_gene1595 5.0kb upstream 5.0kb upstream 14496 true Tp57577_TGAC_v2_scaf_74: 237071-251566 Trifolium pratense
Tp57577_TGAC_v2_gene1595 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_74: 237071-242070 Trifolium pratense
Tp57577_TGAC_v2_gene1595 5.0kb downstream 5.0kb downstream 14496 true Tp57577_TGAC_v2_scaf_74: 242071-256566 Trifolium pratense
Tp57577_TGAC_v2_gene1595 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_74: 251567-256566 Trifolium pratense
Tp57577_TGAC_v2_gene1595 10.0kb upstream 10.0kb upstream 19496 true Tp57577_TGAC_v2_scaf_74: 232071-251566 Trifolium pratense
Tp57577_TGAC_v2_gene1595 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_74: 232071-242070 Trifolium pratense
Tp57577_TGAC_v2_gene1595 10.0kb downstream 10.0kb downstream 19496 true Tp57577_TGAC_v2_scaf_74: 242071-261566 Trifolium pratense
Tp57577_TGAC_v2_gene1595 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_74: 251567-261566 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306260 5265 Fabidae View MSA
124063810 5270 Rosid View MSA
123738168 5271 Pentapetalae View MSA
122792653 5272 Eudicot View MSA
122042179 5273 Angiosperm View MSA
121345581 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain