Gene : Tp57577_TGAC_v2_gene1569 T. pratense v2
Defline:  (1 of 1) PTHR11088:SF30 - ADENYLATE ISOPENTENYLTRANSFERASE 3, CHLOROPLASTIC Genomic Order:  17
Name:  ? Tp57577_TGAC_v2_gene1569 Secondary Identifier:  ? PAC:35952577
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-2681 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene1569 0.5kb upstream 0.5kb upstream 2110 true Tp57577_TGAC_v2_scaf_74: 157331-159440 Trifolium pratense
Tp57577_TGAC_v2_gene1569 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_74: 158941-159440 Trifolium pratense
Tp57577_TGAC_v2_gene1569 0.5kb downstream 0.5kb downstream 2110 true Tp57577_TGAC_v2_scaf_74: 156831-158940 Trifolium pratense
Tp57577_TGAC_v2_gene1569 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_74: 156831-157330 Trifolium pratense
Tp57577_TGAC_v2_gene1569 1.0kb upstream 1.0kb upstream 2610 true Tp57577_TGAC_v2_scaf_74: 157331-159940 Trifolium pratense
Tp57577_TGAC_v2_gene1569 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_74: 158941-159940 Trifolium pratense
Tp57577_TGAC_v2_gene1569 1.0kb downstream 1.0kb downstream 2610 true Tp57577_TGAC_v2_scaf_74: 156331-158940 Trifolium pratense
Tp57577_TGAC_v2_gene1569 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_74: 156331-157330 Trifolium pratense
Tp57577_TGAC_v2_gene1569 2.0kb upstream 2.0kb upstream 3610 true Tp57577_TGAC_v2_scaf_74: 157331-160940 Trifolium pratense
Tp57577_TGAC_v2_gene1569 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_74: 158941-160940 Trifolium pratense
Tp57577_TGAC_v2_gene1569 2.0kb downstream 2.0kb downstream 3610 true Tp57577_TGAC_v2_scaf_74: 155331-158940 Trifolium pratense
Tp57577_TGAC_v2_gene1569 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_74: 155331-157330 Trifolium pratense
Tp57577_TGAC_v2_gene1569 5.0kb upstream 5.0kb upstream 6610 true Tp57577_TGAC_v2_scaf_74: 157331-163940 Trifolium pratense
Tp57577_TGAC_v2_gene1569 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_74: 158941-163940 Trifolium pratense
Tp57577_TGAC_v2_gene1569 5.0kb downstream 5.0kb downstream 6610 true Tp57577_TGAC_v2_scaf_74: 152331-158940 Trifolium pratense
Tp57577_TGAC_v2_gene1569 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_74: 152331-157330 Trifolium pratense
Tp57577_TGAC_v2_gene1569 10.0kb upstream 10.0kb upstream 11610 true Tp57577_TGAC_v2_scaf_74: 157331-168940 Trifolium pratense
Tp57577_TGAC_v2_gene1569 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_74: 158941-168940 Trifolium pratense
Tp57577_TGAC_v2_gene1569 10.0kb downstream 10.0kb downstream 11610 true Tp57577_TGAC_v2_scaf_74: 147331-158940 Trifolium pratense
Tp57577_TGAC_v2_gene1569 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_74: 147331-157330 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304122 5265 Fabidae View MSA
124062328 5270 Rosid View MSA
123742235 5271 Pentapetalae View MSA
122793817 5272 Eudicot View MSA
122042275 5273 Angiosperm View MSA
121309945 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain