Gene : Tp57577_TGAC_v2_gene9327 T. pratense v2
Defline:  (1 of 4) PTHR31311:SF3 - GLYCOSYLTRANSFERASE 6-RELATED Genomic Order:  3
Name:  ? Tp57577_TGAC_v2_gene9327 Secondary Identifier:  ? PAC:35983167
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5936 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene9327 0.5kb upstream 0.5kb upstream 2636 true Tp57577_TGAC_v2_scaf_554: 22046-24681 Trifolium pratense
Tp57577_TGAC_v2_gene9327 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_554: 22046-22545 Trifolium pratense
Tp57577_TGAC_v2_gene9327 0.5kb downstream 0.5kb downstream 2636 true Tp57577_TGAC_v2_scaf_554: 22546-25181 Trifolium pratense
Tp57577_TGAC_v2_gene9327 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_554: 24682-25181 Trifolium pratense
Tp57577_TGAC_v2_gene9327 1.0kb upstream 1.0kb upstream 3136 true Tp57577_TGAC_v2_scaf_554: 21546-24681 Trifolium pratense
Tp57577_TGAC_v2_gene9327 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_554: 21546-22545 Trifolium pratense
Tp57577_TGAC_v2_gene9327 1.0kb downstream 1.0kb downstream 3136 true Tp57577_TGAC_v2_scaf_554: 22546-25681 Trifolium pratense
Tp57577_TGAC_v2_gene9327 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_554: 24682-25681 Trifolium pratense
Tp57577_TGAC_v2_gene9327 2.0kb upstream 2.0kb upstream 4136 true Tp57577_TGAC_v2_scaf_554: 20546-24681 Trifolium pratense
Tp57577_TGAC_v2_gene9327 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_554: 20546-22545 Trifolium pratense
Tp57577_TGAC_v2_gene9327 2.0kb downstream 2.0kb downstream 4136 true Tp57577_TGAC_v2_scaf_554: 22546-26681 Trifolium pratense
Tp57577_TGAC_v2_gene9327 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_554: 24682-26681 Trifolium pratense
Tp57577_TGAC_v2_gene9327 5.0kb upstream 5.0kb upstream 7136 true Tp57577_TGAC_v2_scaf_554: 17546-24681 Trifolium pratense
Tp57577_TGAC_v2_gene9327 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_554: 17546-22545 Trifolium pratense
Tp57577_TGAC_v2_gene9327 5.0kb downstream 5.0kb downstream 7136 true Tp57577_TGAC_v2_scaf_554: 22546-29681 Trifolium pratense
Tp57577_TGAC_v2_gene9327 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_554: 24682-29681 Trifolium pratense
Tp57577_TGAC_v2_gene9327 10.0kb upstream 10.0kb upstream 12136 true Tp57577_TGAC_v2_scaf_554: 12546-24681 Trifolium pratense
Tp57577_TGAC_v2_gene9327 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_554: 12546-22545 Trifolium pratense
Tp57577_TGAC_v2_gene9327 10.0kb downstream 10.0kb downstream 12136 true Tp57577_TGAC_v2_scaf_554: 22546-34681 Trifolium pratense
Tp57577_TGAC_v2_gene9327 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_554: 24682-34681 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041044 5273 Angiosperm View MSA
122302131 5265 Fabidae View MSA
124070170 5270 Rosid View MSA
123745893 5271 Pentapetalae View MSA
122788546 5272 Eudicot View MSA
121352143 5274 Embryophyte View MSA
123428220 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain